ENSMUSG00000070822


Mus musculus

Features
Gene ID: ENSMUSG00000070822
  
Biological name :Zscan18
  
Synonyms : zinc finger and SCAN domain containing 18 / Zscan18
  
Possible biological names infered from orthology : Q8TBC5
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: A1
Gene start: 12768090
Gene end: 12803635
  
Corresponding Affymetrix probe sets: 10560035 (MoGene1.0st)   1435705_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148239
Ensembl peptide - ENSMUSP00000047088
Ensembl peptide - ENSMUSP00000147550
Ensembl peptide - ENSMUSP00000147686
NCBI entrez gene - 232875     See in Manteia.
MGI - MGI:3643810
RefSeq - XM_017322148
RefSeq - XM_011250508
RefSeq - XM_011250509
RefSeq - XM_011250510
RefSeq - NM_001017955
RefSeq - XM_006539791
RefSeq - XM_006539792
RefSeq - XM_006539793
RefSeq - XM_006539794
RefSeq - XM_011250507
RefSeq Peptide - NP_001017955
swissprot - E9PUD6
swissprot - A0A1B0GRW2
Ensembl - ENSMUSG00000070822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8TBC5ENSG00000121413Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp263 / zinc finger protein 263 / O14978* / ZNF263*ENSMUSG0000002252914
Q810A1 / Zkscan6 / zinc finger with KRAB and SCAN domains 6 / ZNF18* / P17022* / zinc finger protein 18*ENSMUSG0000001834712
Q5SXI5 / Zkscan17 / zinc finger with KRAB and SCAN domains 17 / ZNF496* / Q96IT1* / zinc finger protein 496*ENSMUSG0000002047212
Zfp202 / zinc finger protein 202 / O95125* / ZNF202*ENSMUSG0000002560212
Zfp446 / zinc finger protein 446 / Q9NWS9* / ZNF446*ENSMUSG0000003396112
Zfp213 / zinc finger protein 213 / O14771* / ZNF213*ENSMUSG0000007125612
Zfp174 / zinc finger protein 174 / Q15697* / ZNF174*ENSMUSG0000005493911
Zscan25 / zinc finger and SCAN domain containing 25 / Q6NSZ9*ENSMUSG0000007042011
Q8BZ34 / Zfp641 / zinc finger protein 641 / Q96N77* / ZNF641*ENSMUSG000000229877
Scand1 / SCAN domain-containing 1 / P57086*ENSMUSG000000462296


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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