ENSMUSG00000071984


Mus musculus

Features
Gene ID: ENSMUSG00000071984
  
Biological name :Fndc1
  
Synonyms : fibronectin type III domain containing 1 / Fndc1
  
Possible biological names infered from orthology : Q4ZHG4
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: A1
Gene start: 7738569
Gene end: 7827302
  
Corresponding Affymetrix probe sets: 10447649 (MoGene1.0st)   1430119_at (Mouse Genome 430 2.0 Array)   1453321_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000095036
Ensembl peptide - ENSMUSP00000130996
Ensembl peptide - ENSMUSP00000126701
NCBI entrez gene - 68655     See in Manteia.
MGI - MGI:1915905
RefSeq - XM_006523349
RefSeq - XM_006523352
RefSeq - XM_006523351
RefSeq - NM_001081416
RefSeq - XM_006523350
RefSeq Peptide - NP_001074885
swissprot - E9Q8V0
swissprot - E9PXG4
swissprot - E9Q043
Ensembl - ENSMUSG00000071984
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fndc1ENSDARG00000002847Danio rerio
 FNDC1ENSGALG00000011663Gallus gallus
 FNDC1ENSG00000164694Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Abi3bp / ABI gene family, member 3 (NESH) binding protein / Q7Z7G0* / ABI family member 3 binding protein*ENSMUSG0000003525818


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001934 positive regulation of protein phosphorylation ISO
 biological_processGO:0010666 positive regulation of cardiac muscle cell apoptotic process ISO
 biological_processGO:0051223 regulation of protein transport ISO
 biological_processGO:0071456 cellular response to hypoxia ISO
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005911 cell-cell junction ISO
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0031966 mitochondrial membrane ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr