ENSMUSG00000073002


Mus musculus

Features
Gene ID: ENSMUSG00000073002
  
Biological name :Vamp5
  
Synonyms : Q9Z2P8 / Vamp5 / vesicle-associated membrane protein 5
  
Possible biological names infered from orthology : O95183
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: C1
Gene start: 72368794
Gene end: 72380468
  
Corresponding Affymetrix probe sets: 10545401 (MoGene1.0st)   1430522_a_at (Mouse Genome 430 2.0 Array)   1449993_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000073852
Ensembl peptide - ENSMUSP00000098843
Ensembl peptide - ENSMUSP00000145880
NCBI entrez gene - 53620     See in Manteia.
MGI - MGI:1858622
RefSeq - NM_001080742
RefSeq - NM_016872
RefSeq Peptide - NP_001074211
RefSeq Peptide - NP_058568
swissprot - Q9Z2P8
swissprot - Q791P0
swissprot - A0A0U1RP87
Ensembl - ENSMUSG00000073002
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vamp5ENSDARG00000068262Danio rerio
 VAMP5ENSG00000168899Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR016444  Synaptobrevin/Vesicle-associated membrane protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007519 skeletal muscle tissue development IDA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043001 Golgi to plasma membrane protein transport IMP
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0009986 cell surface ISO
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0014704 intercalated disc IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IDA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0031301 integral component of organelle membrane IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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