ENSMUSG00000073131


Mus musculus

Features
Gene ID: ENSMUSG00000073131
  
Biological name :Vma21
  
Synonyms : Q78T54 / Vma21 / VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
  
Possible biological names infered from orthology : Q3ZAQ7 / VMA21, vacuolar ATPase assembly factor
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: A7.3
Gene start: 71815924
Gene end: 71839757
  
Corresponding Affymetrix probe sets: 10512939 (MoGene1.0st)   10600031 (MoGene1.0st)   10606056 (MoGene1.0st)   1427937_at (Mouse Genome 430 2.0 Array)   1434232_a_at (Mouse Genome 430 2.0 Array)   1434233_at (Mouse Genome 430 2.0 Array)   1452607_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110222
Ensembl peptide - ENSMUSP00000110223
Ensembl peptide - ENSMUSP00000110224
NCBI entrez gene - 67048     See in Manteia.
MGI - MGI:1914298
RefSeq - XM_006528261
RefSeq - NM_001081356
RefSeq - NM_001290780
RefSeq - NM_001290781
RefSeq Peptide - NP_001074825
RefSeq Peptide - NP_001277709
RefSeq Peptide - NP_001277710
swissprot - F2Z446
swissprot - F2Z447
swissprot - Q78T54
Ensembl - ENSMUSG00000073131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vma21ENSDARG00000093945Danio rerio
 VMA21ENSGALG00000009065Gallus gallus
 VMA21ENSG00000160131Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Vma21-ps / VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene / VMA21* / Q3ZAQ7* / VMA21, vacuolar ATPase assembly factor*ENSMUSG0000006161961


Protein motifs (from Interpro)
Interpro ID Name
 IPR019013  Vacuolar ATPase assembly integral membrane protein Vma21


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr