ENSMUSG00000073640


Mus musculus

Features
Gene ID: ENSMUSG00000073640
  
Biological name :Rpl27-ps3
  
Synonyms : P61358 / ribosomal protein L27, pseudogene 3 / Rpl27-ps3
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: A1
Gene start: 6332590
Gene end: 6333064
  
Corresponding Affymetrix probe sets: 10360128 (MoGene1.0st)   10381402 (MoGene1.0st)   10389875 (MoGene1.0st)   10453690 (MoGene1.0st)   1416099_at (Mouse Genome 430 2.0 Array)   1448217_a_at (Mouse Genome 430 2.0 Array)   1453096_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000095287
NCBI entrez gene - 108167922     See in Manteia.
MGI - MGI:3646174
swissprot - P61358
swissprot - Q5BLJ9
Ensembl - ENSMUSG00000073640
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX901883.4ENSDARG00000113664Danio rerio
 RPL27ENSGALG00000002837Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl27 / P61358 / 60S ribosomal protein L27 / P61353* / ribosomal protein L27*ENSMUSG00000063316100


Protein motifs (from Interpro)
Interpro ID Name
 IPR001141  Ribosomal protein L27e
 IPR005824  KOW
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2
 IPR018262  Ribosomal protein L27e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit ISS
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0031012 extracellular matrix ISO
 cellular_componentGO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane ISS
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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