ENSMUSG00000074102


Mus musculus

Features
Gene ID: ENSMUSG00000074102
  
Biological name :Rbm15b
  
Synonyms : Q6PHZ5 / Rbm15b / RNA binding motif protein 15B
  
Possible biological names infered from orthology : Q8NDT2
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F1
Gene start: 106880918
Gene end: 106887428
  
Corresponding Affymetrix probe sets: 10596568 (MoGene1.0st)   10596570 (MoGene1.0st)   1437778_at (Mouse Genome 430 2.0 Array)   1454798_at (Mouse Genome 430 2.0 Array)   1454871_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000139726
Ensembl peptide - ENSMUSP00000059330
NCBI entrez gene - 109095     See in Manteia.
MGI - MGI:1923598
RefSeq - NM_175402
RefSeq Peptide - NP_780611
swissprot - A0A087WPD2
swissprot - Q6PHZ5
Ensembl - ENSMUSG00000074102
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm15bENSDARG00000078966Danio rerio
 ENSGALG00000002372Gallus gallus
 Q8NDT2ENSG00000259956Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbm15 / RNA binding motif protein 15 / Q96T37*ENSMUSG0000004810945
Spen / spen family transcription repressor / Q96T58* / spen family transcriptional repressor*ENSMUSG0000004076123


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR010912  Spen paralogue/orthologue C-terminal, metazoa
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR016194  SPOC-like, C-terminal domain superfamily
 IPR034475  RBM15B, RNA recognition motif 1
 IPR034535  RBM15B, RNA recognition motif 2
 IPR034536  RBM15B, RNA recognition motif 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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