ENSMUSG00000078380


Mus musculus

Features
Gene ID: ENSMUSG00000078380
  
Biological name :Gm6096
  
Synonyms : Gm6096
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B1
Gene start: 34251038
Gene end: 34251493
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSMUSP00000100805
MGI - MGI:3649053
swissprot - D3YTY6
Ensembl - ENSMUSG00000078380
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl23aENSDARG00000006316Danio rerio
 RPL23AENSGALG00000003966Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P62751 / Rpl23a / ribosomal protein L23AENSMUSG0000005854683


Protein motifs (from Interpro)
Interpro ID Name
 IPR001014  Ribosomal protein L23/L25, conserved site
 IPR005633  Ribosomal protein L23/L25, N-terminal
 IPR012678  Ribosomal protein L23/L15e core domain superfamily
 IPR013025  Ribosomal protein L25/L23


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr