ENSMUSG00000078815


Mus musculus

Features
Gene ID: ENSMUSG00000078815
  
Biological name :Cacng6
  
Synonyms : Cacng6 / Q8VHW3 / Voltage-dependent calcium channel gamma-6 subunit
  
Possible biological names infered from orthology : calcium voltage-gated channel auxiliary subunit gamma 6 / Q9BXT2
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: A1
Gene start: 3424195
Gene end: 3435667
  
Corresponding Affymetrix probe sets: 10608713 (MoGene1.0st)   1425730_at (Mouse Genome 430 2.0 Array)   1451811_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104287
Ensembl peptide - ENSMUSP00000138622
NCBI entrez gene - 54378     See in Manteia.
MGI - MGI:1859168
RefSeq - XM_006540200
RefSeq - NM_133183
RefSeq Peptide - NP_573446
swissprot - Q14C42
swissprot - Q8VHW3
swissprot - A0A0A0MQD3
Ensembl - ENSMUSG00000078815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cacng6aENSDARG00000036457Danio rerio
 cacng6bENSDARG00000046079Danio rerio
 CACNG6ENSG00000130433Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cacng1 / O70578 / Voltage-dependent calcium channel gamma-1 subunit / Q06432* / calcium voltage-gated channel auxiliary subunit gamma 1*ENSMUSG0000002072229


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR008368  Voltage-dependent calcium channel, gamma subunit
 IPR008370  Voltage-dependent calcium channel, gamma-6 subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Atp1a1Gt(OST31117)Lex/Atp1a1Gt(OST31117)Lex
Genetic Background: involves: 129S5/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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