Manteia

ENSMUSG00000079559

Mus musculus

Features

Gene ID:	ENSMUSG00000079559

Biological name :	Colca2

Synonyms :	Colca2 / COLCA2 homolog

Possible biological names infered from orthology :	A8K830 / colorectal cancer associated 2

Species:	Mus musculus

Chr. number:	9
Strand:	-1
Band:	A5.3
Gene start:	51270258
Gene end:	51278569

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSMUSP00000110070 Ensembl peptide - ENSMUSP00000150539 NCBI entrez gene - 100502940 See in Manteia. MGI - MGI:2685530 RefSeq - XM_011242375 RefSeq - NM_001195681 RefSeq - XM_006509896 RefSeq - XM_011242374 RefSeq - XM_006509895 RefSeq Peptide - NP_001182610 swissprot - F8VPY8 Ensembl - ENSMUSG00000079559

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
A8K830	ENSG00000214290	Homo sapiens

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID

Name

No match

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0008150	biological_process	ND
cellular_component	GO:0005737	cytoplasm	ISO
molecular_function	GO:0003674	molecular_function	ND

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0000063	reduced bone density	"decreased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:57315]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0001258	decreased body length	"decreased crown to tail distance compared to controls" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0001489	decreased startle reflex	"greater threshold or less severe reflex response to variable stimuli, often auditory; usually measured by amplitude of whole body flinch" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, What s Wrong With My Mouse?:ISBN 0-471-31639-3]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0001925	male infertility	"inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0003795	abnormal bone structure		Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0003928	increased heart rate variability	"increased variation of beat-to-beat intervals of the heart, usually indicitive of a healthy heart" [RGD:Rat Genome Database submission]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0003961	decreased lean body mass	"less than average fat-free physical bulk or volume of the body including all its components except adipose tissue" [honda:Hiraoki Onda, Mouse GEnome Informatics Curator]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0004924	abnormal behavior	"anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0005385	cardiovascular system phenotype		Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0010052	increased grip strength	"greater ability to grasp and hold objects, often measured as time spent hanging from an object or wire" [ISBN:0471316393 "Crawley, JN, What s Wrong with my Mouse: Behavioral Phenotyping of Transgenic and Knockout Mice"]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0010124	decreased bone mineral content	"reduction in the amount (usually in grams/cm) of bone mineral divided by a bone-scanned area" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0011967	increased or absent threshold for auditory brainstem response	"increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi
MP:0013278	decreased fasted circulating glucose level	"reduction in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]	Show Allelic Composition: Gm648^{tm1e(KOMP)Wtsi}/Gm648^{tm1e(KOMP)Wtsi} Genetic Background: C57BL/6N-Gm648^{tm1e(KOMP)Wtsi}/Wtsi

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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