ENSMUSG00000080539


Mus musculus

Features
Gene ID: ENSMUSG00000080539
  
Biological name :Gm25542
  
Synonyms : Gm25542 / predicted gene, 25542
  
Possible biological names infered from orthology : RNA, U6atac small nuclear 40, pseudogene / RNU6ATAC40P
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: C3
Gene start: 68384942
Gene end: 68385035
  
Corresponding Affymetrix probe sets:
  
Cross references: MGI - MGI:5455319
Ensembl - ENSMUSG00000080539
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RF00619ENSGALG00000025192Gallus gallus
 RNU6ATAC40PENSG00000221507Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm23879 / predicted gene, 23879 / RNU6ATAC19P* / RNA, U6atac small nuclear 19, pseudogene*ENSMUSG0000008052479
Gm25541 / predicted gene, 25541 / RNU6ATAC* / RNA, U6atac small nuclear (U12-dependent splicing)*ENSMUSG0000008053879
Gm24831 / predicted gene, 24831ENSMUSG0000008042878
Gm26044 / predicted gene, 26044 / RNU6ATAC2P* / RNA, U6atac small nuclear 2, pseudogene*ENSMUSG0000008056677
Gm26473 / predicted gene, 26473ENSMUSG0000008041374
Gm22713 / predicted gene, 22713 / RNU6ATAC11P* / RNA, U6atac small nuclear 11, pseudogene*ENSMUSG0000008054574
Gm23494 / predicted gene, 23494 / RNU6ATAC2P* / RNA, U6atac small nuclear 2, pseudogene*ENSMUSG0000008048072
Gm23109 / predicted gene, 23109ENSMUSG0000008051770
Gm23336 / predicted gene, 23336ENSMUSG0000008067370
Gm24922 / predicted gene, 24922ENSMUSG0000008913667
Gm23441 / predicted gene, 23441ENSMUSG0000008789366
Gm22105 / predicted gene, 22105ENSMUSG0000008038465
Gm26249 / predicted gene, 26249ENSMUSG0000008035864
Gm24191 / predicted gene, 24191 / RNU6ATAC23P* / RNA, U6atac small nuclear 23, pseudogene*ENSMUSG0000008860264
Gm23031 / predicted gene, 23031 / RNU6ATAC18P* / RNA, U6atac small nuclear 18, pseudogene*ENSMUSG0000008862364
Gm26007 / predicted gene, 26007ENSMUSG0000008942364
Gm26357 / predicted gene, 26357 / RNU6ATAC42P* / RNU6ATAC12P* / RNU6ATAC14P* / RNA, U6atac small nuclear 12, pseudogene* / RNA, U6atac small nuclear 14, pseudogene* / RNA, U6atac small nucl...ENSMUSG0000008884363
Gm25309 / predicted gene, 25309ENSMUSG0000008037862
Gm24274 / predicted gene, 24274 / RNU6ATAC15P* / RNA, U6atac small nuclear 15, pseudogene*ENSMUSG0000008043762
Gm24833 / predicted gene, 24833 / RNU6ATAC23P* / RNA, U6atac small nuclear 23, pseudogene*ENSMUSG0000008042561


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match