ENSMUSG00000090996


Mus musculus

Features
Gene ID: ENSMUSG00000090996
  
Biological name :Gm20458
  
Synonyms : Gm20458 / SYS1-DBNDD2 readthrough (NMD candidate)
  
Possible biological names infered from orthology : SYS1-DBNDD2
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 164460967
Gene end: 164490760
  
Corresponding Affymetrix probe sets: 10478495 (MoGene1.0st)   1451431_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126658
MGI - MGI:5141923
swissprot - E9PXJ7
Ensembl - ENSMUSG00000090996
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sys1ENSDARG00000017606Danio rerio
 SYS1ENSGALG00000003929Gallus gallus
 SYS1-DBNDD2ENSG00000254806Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sys1 / Q78S06 / SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)ENSMUSG0000004550397


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006895 Golgi to endosome transport IBA
 biological_processGO:0043001 Golgi to plasma membrane protein transport IBA
 cellular_componentGO:0005802 trans-Golgi network IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr