ENSMUSG00000092341


Mus musculus

Features
Gene ID: ENSMUSG00000092341
  
Biological name :Malat1
  
Synonyms : Malat1
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 5795690
Gene end: 5802672
  
Corresponding Affymetrix probe sets: 10465244 (MoGene1.0st)   1418188_a_at (Mouse Genome 430 2.0 Array)   1418189_s_at (Mouse Genome 430 2.0 Array)   1427285_s_at (Mouse Genome 430 2.0 Array)   1429060_at (Mouse Genome 430 2.0 Array)   1436202_at (Mouse Genome 430 2.0 Array)   1438403_s_at (Mouse Genome 430 2.0 Array)   1452378_at (Mouse Genome 430 2.0 Array)   
  
Cross references: MGI - MGI:1919539
Ensembl - ENSMUSG00000092341
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001847 brain inflammation "local accumulation of fluid, plasma proteins, and leukocytes in the brain" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7]
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Allelic Composition: Rgs9tm1(cre)Yql/Rgs9+,Tg(CAG-Ppard*E411P)#Als/0
Genetic Background: B6J.Cg-Rgs9tm1(cre)Yql Tg(CAG-Ppard*E411P)#Als

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Mycntm1.1Mlit/Mycntm1.1Mlit,Tg(CAG-tTS)1Mlit/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * C57BL/6J

 MP:0003076 increased susceptibility to ischemic brain injury "increased lesion size following loss of circulation in a region of the brain; may be induced or spontaneous" [J:90111, smb:Susan M. Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Rgs9tm1(cre)Yql/Rgs9+,Tg(CAG-Ppard*E411P)#Als/0
Genetic Background: B6J.Cg-Rgs9tm1(cre)Yql Tg(CAG-Ppard*E411P)#Als

 MP:0003633 abnormal nervous system physiology 
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Allelic Composition: Rgs9tm1(cre)Yql/Rgs9+,Tg(CAG-Ppard*E411P)#Als/0
Genetic Background: B6J.Cg-Rgs9tm1(cre)Yql Tg(CAG-Ppard*E411P)#Als

 MP:0006060 increased cerebral infarction size "increased size of necrotic area of the cerebrum resulting from a sudden insufficiency of arterial or venous blood supply" [RGD:Rat Genome Database submission, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Rgs9tm1(cre)Yql/Rgs9+,Tg(CAG-Ppard*E411P)#Als/0
Genetic Background: B6J.Cg-Rgs9tm1(cre)Yql Tg(CAG-Ppard*E411P)#Als

 MP:0014178 increased brain apoptosis "increase in the number of cells of the brain undergoing programmed cell death" [MGI:Anna]
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Allelic Composition: Rgs9tm1(cre)Yql/Rgs9+,Tg(CAG-Ppard*E411P)#Als/0
Genetic Background: B6J.Cg-Rgs9tm1(cre)Yql Tg(CAG-Ppard*E411P)#Als

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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