100036767


Danio rerio (NCBI)

Features
Gene ID: 100036767
  
Biological name :
  
Synonyms : lh2|zgc:101868 / plod2 / procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets:
  
Cross references: RefSeq - NP_001007378.2
RefSeq - NP_001082933.1
RefSeq - NC_007135.7
RefSeq - 147898979
RefSeq - 194440678
RefSeq - NM_001007377.2
RefSeq - NM_001089464.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000011821 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0017185 peptidyl-lysine hydroxylation IBA
 biological_processGO:0030199 collagen fibril organization IMP
 biological_processGO:0030903 notochord development IMP
 biological_processGO:0032963 collagen metabolic process IBA
 biological_processGO:0046947 hydroxylysine biosynthetic process IBA
 biological_processGO:0048741 skeletal muscle fiber development IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008475 procollagen-lysine 5-dioxygenase activity IMP
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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