100036767


Danio rerio (NCBI)
activitydevelopmentcollagenprocessbindingskeletalionoxidoreductasepeptidyl-lysinehydroxylationfibrilorganizationnotochordmetabolichydroxylysinebiosyntheticmusclefiberoxidation-reductiontrimerendoplasmicreticulumironprocollagen-lysine-dioxygenaseactingpaireddonorsincorporationreduction

Features
Gene ID: 100036767
  
Biological name :
  
Synonyms : lh2|zgc:101868 / plod2 / procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets:
  
Cross references: RefSeq - NP_001007378.2
RefSeq - NP_001082933.1
RefSeq - NC_007135.7
RefSeq - 147898979
RefSeq - 194440678
RefSeq - NM_001007377.2
RefSeq - NM_001089464.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000011821 to get all the annotations available for this gene.


Gene Ontology (GO)
anatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical structure developmentnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcollagen metabolic processbiosynthetic processsmall molecule metabolic processcellular developmental processoxidation-reduction processanatomical sanatomical structure developmentnitrogen comnitrogen compound metabolic processcellular metcellular metabolic processprimary metaprimary metabolic processorganic subsorganic substance metabolic processcellular comcellular component organizationcollagen metcollagen metabolic processbiosyntheticbiosynthetic processsmall molecusmall molecule metabolic processcellular devcellular developmental processoxidation-reoxidation-reduction process
ion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingoxidoreductase activitycatalytic activity, acting on a proteincarbohydrate bindingcofactor bindingsmall molecule bindingion bindingion bindingoxidoreductase activityoxidoreductase activitycatalytic activity, actcatalytic activity, acting on a proteincarbohydrate bindingcarbohydrate bindingcofactor bindingcofactor bindingsmall molecule bindingsmall molecule binding
protein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexprotein-containing complexcellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0017185 peptidyl-lysine hydroxylation IBA
 biological_processGO:0030199 collagen fibril organization IMP
 biological_processGO:0030903 notochord development IMP
 biological_processGO:0032963 collagen metabolic process IBA
 biological_processGO:0046947 hydroxylysine biosynthetic process IBA
 biological_processGO:0048741 skeletal muscle fiber development IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008475 procollagen-lysine 5-dioxygenase activity IMP
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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