10014


Homo sapiens (NCBI)

Features
Gene ID: 10014
  
Biological name :
  
Synonyms : HD5|NY-CO-9 / HDAC5 / histone deacetylase 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 202455_at (Human Genome U133 Plus 2.0 Array)   229408_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 62750349
RefSeq - 1034597615
RefSeq - 1034597617
RefSeq - 1034597619
RefSeq - 1034597621
RefSeq - 1034597623
RefSeq - 1034597630
RefSeq - 530411256
RefSeq - 530411258
RefSeq - 62750347
RefSeq - 1034597613
RefSeq - 767993111
RefSeq - 767993113
RefSeq - NC_000017.11
RefSeq - NP_001015053.1
RefSeq - NP_005465.2
RefSeq - XP_005256962.1
RefSeq - XP_005256963.1
RefSeq - XP_011522451.1
RefSeq - XP_011522452.1
RefSeq - XP_016879477.1
RefSeq - XP_016879478.1
RefSeq - XP_016879479.1
RefSeq - XP_016879480.1
RefSeq - XP_016879481.1
RefSeq - XP_016879482.1
RefSeq - XP_016879485.1
RefSeq - XM_017023992.1
RefSeq - NM_001015053.1
RefSeq - NM_005474.4
RefSeq - NM_139205.1
RefSeq - XM_017023993.1
RefSeq - XM_017023996.1
RefSeq - XM_005256905.2
RefSeq - XM_005256906.4
RefSeq - XM_011524149.2
RefSeq - XM_011524150.1
RefSeq - XM_017023988.1
RefSeq - XM_017023989.1
RefSeq - XM_017023990.1
RefSeq - XM_017023991.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000108840 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006325 chromatin organization TAS
 biological_processGO:0006338 chromatin remodeling TAS
 biological_processGO:0006342 chromatin silencing TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006476 protein deacetylation IMP
 biological_processGO:0006954 inflammatory response TAS
 biological_processGO:0010830 regulation of myotube differentiation ISS
 biological_processGO:0010832 negative regulation of myotube differentiation IMP
 biological_processGO:0014823 response to activity IEA
 biological_processGO:0016575 histone deacetylation IDA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0030183 B cell differentiation TAS
 biological_processGO:0032869 cellular response to insulin stimulus NAS
 biological_processGO:0040029 regulation of gene expression, epigenetic IMP
 biological_processGO:0042113 B cell activation TAS
 biological_processGO:0042220 response to cocaine IEA
 biological_processGO:0043393 regulation of protein binding IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated TAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0070932 histone H3 deacetylation IEA
 biological_processGO:0071222 cellular response to lipopolysaccharide IEA
 biological_processGO:0090051 negative regulation of cell migration involved in sprouting angiogenesis IMP
 biological_processGO:2000615 regulation of histone H3-K9 acetylation IMP
 cellular_componentGO:0000118 histone deacetylase complex TAS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016607 nuclear speck IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding IPI
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0004407 histone deacetylase activity IDA
 molecular_functionGO:0005080 protein kinase C binding IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IPI
 molecular_functionGO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
 molecular_functionGO:0033558 protein deacetylase activity IMP
 molecular_functionGO:0042826 histone deacetylase binding IPI
 molecular_functionGO:0044212 transcription regulatory region DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070491 repressing transcription factor binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr