11338


Homo sapiens (NCBI)

Features
Gene ID: 11338
  
Biological name :
  
Synonyms : U2AF2 / U2AF65 / U2 small nuclear RNA auxiliary factor 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 214171_s_at (Human Genome U133 Plus 2.0 Array)   218381_s_at (Human Genome U133 Plus 2.0 Array)   218382_s_at (Human Genome U133 Plus 2.0 Array)   229508_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 578833896
RefSeq - 6005926
RefSeq - 60279268
RefSeq - 768006275
RefSeq - NC_000019.10
RefSeq - NG_032904.1
RefSeq - NP_001012496.1
RefSeq - NP_009210.1
RefSeq - XP_006723057.1
RefSeq - XP_011524712.1
RefSeq - NM_001012478.1
RefSeq - NM_007279.2
RefSeq - XM_006722994.2
RefSeq - XM_011526410.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000063244 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0031397 negative regulation of protein ubiquitination IMP
 biological_processGO:0033120 positive regulation of RNA splicing IDA
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IDA
 cellular_componentGO:0000243 commitment complex IBA
 cellular_componentGO:0000974 Prp19 complex IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005681 spliceosomal complex IDA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0071004 U2-type prespliceosome IDA
 cellular_componentGO:0089701 U2AF IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008187 poly-pyrimidine tract binding IBA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0030628 pre-mRNA 3"-splice site binding IDA
 molecular_functionGO:0070742 C2H2 zinc finger domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr