13018


Mus musculus (NCBI)

Features
Gene ID: 13018
  
Biological name :
  
Synonyms : AW108038 / CCCTC-binding factor / Ctcf
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1418330_at (Mouse Genome 430 2.0 Array)   1449042_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - XP_017168046.1
RefSeq - 1306251274
RefSeq - 31044459
RefSeq - 568956075
RefSeq - 568956077
RefSeq - 568956079
RefSeq - 568956081
RefSeq - 568956083
RefSeq - NC_000074.6
RefSeq - NP_001345853.1
RefSeq - NP_851839.1
RefSeq - XP_006530707.1
RefSeq - XP_006530708.1
RefSeq - XP_006530709.1
RefSeq - XP_006530710.1
RefSeq - XP_006530711.1
RefSeq - 1039782130
RefSeq - NM_001358924.1
RefSeq - NM_181322.3
RefSeq - XM_006530648.2
RefSeq - XM_017312557.1
RefSeq - XM_006530644.2
RefSeq - XM_006530645.3
RefSeq - XM_006530646.3
RefSeq - XM_006530647.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000005698 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0006306 DNA methylation IMP
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006349 regulation of gene expression by genetic imprinting IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IDA
 biological_processGO:0007059 chromosome segregation IEA
 biological_processGO:0008285 negative regulation of cell proliferation ISO
 biological_processGO:0009048 dosage compensation by inactivation of X chromosome TAS
 biological_processGO:0010216 maintenance of DNA methylation IMP
 biological_processGO:0010628 positive regulation of gene expression ISO
 biological_processGO:0010629 negative regulation of gene expression IMP
 biological_processGO:0016584 nucleosome positioning ISO
 biological_processGO:0031060 regulation of histone methylation IMP
 biological_processGO:0035065 regulation of histone acetylation IMP
 biological_processGO:0040029 regulation of gene expression, epigenetic ISO
 biological_processGO:0040030 regulation of molecular function, epigenetic ISO
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISO
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISO
 biological_processGO:0071459 protein localization to chromosome, centromeric region ISO
 biological_processGO:1902895 positive regulation of pri-miRNA transcription by RNA polymerase II ISO
 cellular_componentGO:0000775 chromosome, centromeric region ISO
 cellular_componentGO:0000793 condensed chromosome ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043035 chromatin insulator sequence binding ISO
 molecular_functionGO:0043565 sequence-specific DNA binding ISO
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISO
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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