1307


Homo sapiens (NCBI)

Features
Gene ID: 1307
  
Biological name :
  
Synonyms : 447AA|FP1572 / COL16A1 / collagen type XVI alpha 1 chain
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 204345_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 767902478
RefSeq - 1034555634
RefSeq - 1034555636
RefSeq - 1034555644
RefSeq - 1034555646
RefSeq - 530361825
RefSeq - 767902463
RefSeq - 767902465
RefSeq - 767902467
RefSeq - 767902471
RefSeq - 767902473
RefSeq - 767902476
RefSeq - 100913220
RefSeq - 767902480
RefSeq - NC_000001.11
RefSeq - NP_001847.3
RefSeq - XP_005270538.1
RefSeq - XP_011539024.1
RefSeq - XP_011539025.1
RefSeq - XP_011539026.1
RefSeq - XP_011539028.1
RefSeq - XP_011539029.1
RefSeq - XP_011539030.1
RefSeq - XP_011539031.1
RefSeq - XP_011539032.1
RefSeq - XP_016855827.1
RefSeq - XP_016855828.1
RefSeq - XP_016855829.1
RefSeq - XP_016855830.1
RefSeq - XM_017000341.1
RefSeq - XR_001736983.1
RefSeq - XR_001736984.1
RefSeq - XR_946546.3
RefSeq - XR_001736981.1
RefSeq - NM_001856.3
RefSeq - XR_001736982.1
RefSeq - XM_005270481.1
RefSeq - XM_011540722.1
RefSeq - XM_011540723.1
RefSeq - XM_011540724.1
RefSeq - XM_011540726.3
RefSeq - XM_011540727.2
RefSeq - XM_011540728.2
RefSeq - XM_011540729.1
RefSeq - XM_011540730.1
RefSeq - XM_017000338.1
RefSeq - XM_017000339.1
RefSeq - XM_017000340.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000084636 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IDA
 biological_processGO:0007229 integrin-mediated signaling pathway TAS
 biological_processGO:0007565 female pregnancy TAS
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0033622 integrin activation IDA
 biological_processGO:0033627 cell adhesion mediated by integrin IDA
 biological_processGO:0051894 positive regulation of focal adhesion assembly IDA
 biological_processGO:0071230 cellular response to amino acid stimulus IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005597 collagen type XVI trimer TAS
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0062023 collagen-containing extracellular matrix HDA
 molecular_functionGO:0005178 integrin binding IDA
 molecular_functionGO:0005201 extracellular matrix structural constituent IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030020 extracellular matrix structural constituent conferring tensile strength HDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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