19885


Mus musculus (NCBI)

Features
Gene ID: 19885
  
Biological name :
  
Synonyms : Nr1f3|RORgamma|TOR|Thor / RAR-related orphan receptor gamma / Rorc
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1425792_a_at (Mouse Genome 430 2.0 Array)   1425793_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - XP_006501227.1
RefSeq - 188536040
RefSeq - 568922134
RefSeq - 568922136
RefSeq - 657188850
RefSeq - NC_000069.6
RefSeq - NP_001280663.1
RefSeq - NP_035411.2
RefSeq - XP_006501225.3
RefSeq - XP_006501226.1
RefSeq - 1039763972
RefSeq - XM_006501162.3
RefSeq - NM_001293734.1
RefSeq - NM_011281.3
RefSeq - XM_006501163.2
RefSeq - XM_006501164.3
RefSeq - NR_121656.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000028150 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated ISO
 biological_processGO:0006468 protein phosphorylation IMP
 biological_processGO:0006805 xenobiotic metabolic process IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0010906 regulation of glucose metabolic process IMP
 biological_processGO:0019218 regulation of steroid metabolic process IMP
 biological_processGO:0030154 cell differentiation IMP
 biological_processGO:0032620 interleukin-17 production IDA
 biological_processGO:0032922 circadian regulation of gene expression IMP
 biological_processGO:0033077 T cell differentiation in thymus IMP
 biological_processGO:0036315 cellular response to sterol ISO
 biological_processGO:0042093 T-helper cell differentiation IMP
 biological_processGO:0042753 positive regulation of circadian rhythm IDA
 biological_processGO:0045586 regulation of gamma-delta T cell differentiation IDA
 biological_processGO:0045598 regulation of fat cell differentiation IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0046632 alpha-beta T cell differentiation IMP
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:0048535 lymph node development IMP
 biological_processGO:0048537 mucosal-associated lymphoid tissue development IMP
 biological_processGO:0048541 Peyer"s patch development IMP
 biological_processGO:0060612 adipose tissue development IMP
 biological_processGO:0060850 regulation of transcription involved in cell fate commitment IDA
 biological_processGO:0070244 negative regulation of thymocyte apoptotic process IMP
 biological_processGO:0072539 T-helper 17 cell differentiation IMP
 biological_processGO:0072615 interleukin-17 secretion IMP
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0009897 external side of plasma membrane IDA
 cellular_componentGO:0016604 nuclear body ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001223 transcription coactivator binding IPI
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008142 oxysterol binding ISO
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0098531 transcription factor activity, direct ligand regulated sequence-specific DNA binding ISO


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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