20471


Mus musculus (NCBI)

Features
Gene ID: 20471
  
Biological name :
  
Synonyms : BB138287 / sine oculis-related homeobox 1 / Six1
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1427277_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - 226958387
RefSeq - NC_000078.6
RefSeq - NP_033215.2
RefSeq - NM_009189.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000051367 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0001657 ureteric bud development IMP
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IGI
 biological_processGO:0001759 organ induction IMP
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0003151 outflow tract morphogenesis IGI
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IDA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007389 pattern specification process IMP
 biological_processGO:0007519 skeletal muscle tissue development IMP
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0008582 regulation of synaptic growth at neuromuscular junction IGI
 biological_processGO:0010468 regulation of gene expression IGI
 biological_processGO:0014842 regulation of skeletal muscle satellite cell proliferation IDA
 biological_processGO:0014857 regulation of skeletal muscle cell proliferation IBA
 biological_processGO:0021610 facial nerve morphogenesis IMP
 biological_processGO:0022008 neurogenesis IMP
 biological_processGO:0030855 epithelial cell differentiation IMP
 biological_processGO:0030878 thyroid gland development IMP
 biological_processGO:0030910 olfactory placode formation IMP
 biological_processGO:0032880 regulation of protein localization IGI
 biological_processGO:0034504 protein localization to nucleus ISO
 biological_processGO:0035909 aorta morphogenesis IGI
 biological_processGO:0042472 inner ear morphogenesis IGI
 biological_processGO:0042474 middle ear morphogenesis IMP
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:0043524 negative regulation of neuron apoptotic process IMP
 biological_processGO:0043586 tongue development IMP
 biological_processGO:0045664 regulation of neuron differentiation IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0048513 animal organ development IEA
 biological_processGO:0048538 thymus development IMP
 biological_processGO:0048665 neuron fate specification IGI
 biological_processGO:0048699 generation of neurons IMP
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IGI
 biological_processGO:0048704 embryonic skeletal system morphogenesis IGI
 biological_processGO:0048705 skeletal system morphogenesis IMP
 biological_processGO:0048741 skeletal muscle fiber development IBA
 biological_processGO:0048839 inner ear development IMP
 biological_processGO:0048856 anatomical structure development IGI
 biological_processGO:0050678 regulation of epithelial cell proliferation IMP
 biological_processGO:0051451 myoblast migration IGI
 biological_processGO:0060037 pharyngeal system development IMP
 biological_processGO:0061055 myotome development IMP
 biological_processGO:0061197 fungiform papilla morphogenesis IMP
 biological_processGO:0061551 trigeminal ganglion development IMP
 biological_processGO:0071599 otic vesicle development IMP
 biological_processGO:0072001 renal system development IGI
 biological_processGO:0072075 metanephric mesenchyme development IMP
 biological_processGO:0072095 regulation of branch elongation involved in ureteric bud branching IMP
 biological_processGO:0072107 positive regulation of ureteric bud formation IMP
 biological_processGO:0072172 mesonephric tubule formation IMP
 biological_processGO:0072193 ureter smooth muscle cell differentiation IMP
 biological_processGO:0072513 positive regulation of secondary heart field cardioblast proliferation IGI
 biological_processGO:0090103 cochlea morphogenesis IMP
 biological_processGO:0090190 positive regulation of branching involved in ureteric bud morphogenesis IMP
 biological_processGO:0090191 negative regulation of branching involved in ureteric bud morphogenesis IMP
 biological_processGO:1905243 cellular response to 3,3",5-triiodo-L-thyronine ISO
 biological_processGO:2000729 positive regulation of mesenchymal cell proliferation involved in ureter development IGI
 biological_processGO:2001014 regulation of skeletal muscle cell differentiation IDA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005667 transcription factor complex IPI
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding IBA
 molecular_functionGO:0001223 transcription coactivator binding ISO
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0003682 chromatin binding IGI
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding ISO
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISO


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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