208727


Mus musculus (NCBI)

Features
Gene ID: 208727
  
Biological name :
  
Synonyms : 4932408F19Rik|HD4 / Hdac4 / histone deacetylase 4
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1436758_at (Mouse Genome 430 2.0 Array)   1447566_at (Mouse Genome 430 2.0 Array)   1454693_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - 568908497
RefSeq - 1039728079
RefSeq - 1039728081
RefSeq - 1039728083
RefSeq - 1039728086
RefSeq - 1039728088
RefSeq - 1039728090
RefSeq - 1039728092
RefSeq - 1039728094
RefSeq - 1039728097
RefSeq - 1039728099
RefSeq - 46402201
RefSeq - 1039728077
RefSeq - 568908499
RefSeq - 568908501
RefSeq - 568908503
RefSeq - 568908505
RefSeq - NC_000067.6
RefSeq - NP_997108.1
RefSeq - XP_006529374.1
RefSeq - XP_006529375.1
RefSeq - XP_006529376.1
RefSeq - XP_006529377.1
RefSeq - XP_006529378.1
RefSeq - XP_017174965.1
RefSeq - XP_017174966.1
RefSeq - XP_017174967.1
RefSeq - XP_017174968.1
RefSeq - XP_017174969.1
RefSeq - XP_017174971.1
RefSeq - XP_017174975.1
RefSeq - XP_017174976.1
RefSeq - XP_017174977.1
RefSeq - XP_017174987.1
RefSeq - XP_017174990.1
RefSeq - NM_207225.2
RefSeq - XM_017319501.1
RefSeq - XM_006529311.3
RefSeq - XM_006529312.1
RefSeq - XM_006529313.1
RefSeq - XM_006529314.3
RefSeq - XM_006529315.2
RefSeq - XM_017319476.1
RefSeq - XM_017319477.1
RefSeq - XM_017319478.1
RefSeq - XM_017319479.1
RefSeq - XM_017319480.1
RefSeq - XM_017319482.1
RefSeq - XM_017319486.1
RefSeq - XM_017319487.1
RefSeq - XM_017319488.1
RefSeq - XM_017319498.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000026313 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0002076 osteoblast development IMP
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006338 chromatin remodeling ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006476 protein deacetylation ISO
 biological_processGO:0008284 positive regulation of cell proliferation ISO
 biological_processGO:0008285 negative regulation of cell proliferation IMP
 biological_processGO:0010592 positive regulation of lamellipodium assembly ISO
 biological_processGO:0010832 negative regulation of myotube differentiation ISO
 biological_processGO:0010882 regulation of cardiac muscle contraction by calcium ion signaling IMP
 biological_processGO:0014894 response to denervation involved in regulation of muscle adaptation IMP
 biological_processGO:0014911 positive regulation of smooth muscle cell migration ISO
 biological_processGO:0016575 histone deacetylation ISO
 biological_processGO:0033235 positive regulation of protein sumoylation ISO
 biological_processGO:0034983 peptidyl-lysine deacetylation ISO
 biological_processGO:0040029 regulation of gene expression, epigenetic ISO
 biological_processGO:0042493 response to drug ISO
 biological_processGO:0043393 regulation of protein binding ISO
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity ISO
 biological_processGO:0043525 positive regulation of neuron apoptotic process ISO
 biological_processGO:0045668 negative regulation of osteoblast differentiation IMP
 biological_processGO:0045820 negative regulation of glycolytic process IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISO
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0048661 positive regulation of smooth muscle cell proliferation ISO
 biological_processGO:0048742 regulation of skeletal muscle fiber development IGI
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity ISO
 biological_processGO:0051153 regulation of striated muscle cell differentiation IGI
 biological_processGO:0070555 response to interleukin-1 ISO
 biological_processGO:0070932 histone H3 deacetylation ISO
 biological_processGO:0070933 histone H4 deacetylation ISO
 biological_processGO:1902894 negative regulation of pri-miRNA transcription by RNA polymerase II IMP
 biological_processGO:1903428 positive regulation of reactive oxygen species biosynthetic process ISO
 cellular_componentGO:0000118 histone deacetylase complex ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0017053 transcriptional repressor complex ISO
 cellular_componentGO:0030017 sarcomere ISO
 cellular_componentGO:0030018 Z disc ISO
 cellular_componentGO:0031594 neuromuscular junction IDA
 cellular_componentGO:0031672 A band ISO
 cellular_componentGO:0032991 protein-containing complex ISO
 cellular_componentGO:0042641 actomyosin IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding ISO
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003714 transcription corepressor activity IGI
 molecular_functionGO:0004407 histone deacetylase activity ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding ISO
 molecular_functionGO:0008270 zinc ion binding ISO
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019901 protein kinase binding IPI
 molecular_functionGO:0030955 potassium ion binding ISO
 molecular_functionGO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
 molecular_functionGO:0033558 protein deacetylase activity ISO
 molecular_functionGO:0033613 activating transcription factor binding ISO
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0042826 histone deacetylase binding ISO
 molecular_functionGO:0043565 sequence-specific DNA binding ISO
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISO
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070491 repressing transcription factor binding ISO
 molecular_functionGO:1990841 promoter-specific chromatin binding ISO


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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