20997


Mus musculus (NCBI)

Features
Gene ID: 20997
  
Biological name :
  
Synonyms : brachyury, T-box transcription factor T / Bra|D17Mit170|Low|Lr|T1|Tbxt|Tl2|Tl3|cou|me75
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1419304_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - NC_000083.6
RefSeq - XP_011244501.1
RefSeq - XP_011244503.1
RefSeq - XP_011244504.1
RefSeq - XP_011244505.1
RefSeq - XP_011244507.1
RefSeq - XP_011244508.1
RefSeq - 6678203
RefSeq - 755555517
RefSeq - NP_033335.1
RefSeq - 755555521
RefSeq - 755555523
RefSeq - 755555525
RefSeq - 755555529
RefSeq - 755555531
RefSeq - XR_385171.2
RefSeq - NM_009309.2
RefSeq - XM_011246199.1
RefSeq - XM_011246201.1
RefSeq - XM_011246202.1
RefSeq - XM_011246203.1
RefSeq - XM_011246205.2
RefSeq - XM_011246206.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000062327 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0001570 vasculogenesis IMP
 biological_processGO:0001756 somitogenesis IMP
 biological_processGO:0001839 neural plate morphogenesis IMP
 biological_processGO:0001843 neural tube closure IMP
 biological_processGO:0003007 heart morphogenesis ISO
 biological_processGO:0003257 positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IDA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007341 penetration of zona pellucida IMP
 biological_processGO:0007498 mesoderm development IMP
 biological_processGO:0007509 mesoderm migration involved in gastrulation IMP
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0009653 anatomical structure morphogenesis IMP
 biological_processGO:0009952 anterior/posterior pattern specification IMP
 biological_processGO:0014028 notochord formation IMP
 biological_processGO:0022414 reproductive process IMP
 biological_processGO:0023019 signal transduction involved in regulation of gene expression IDA
 biological_processGO:0030509 BMP signaling pathway IDA
 biological_processGO:0030903 notochord development IMP
 biological_processGO:0036342 post-anal tail morphogenesis IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0048706 embryonic skeletal system development IMP
 biological_processGO:0055007 cardiac muscle cell differentiation NAS
 biological_processGO:0060070 canonical Wnt signaling pathway IDA
 biological_processGO:0060349 bone morphogenesis IGI
 biological_processGO:0060395 SMAD protein signal transduction IDA
 biological_processGO:0061371 determination of heart left/right asymmetry IMP
 cellular_componentGO:0000785 chromatin IMP
 cellular_componentGO:0000790 nuclear chromatin ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding ISO
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IDA
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding IPI
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding ISO
 molecular_functionGO:0001191 transcriptional repressor activity, RNA polymerase II transcription factor binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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