23064


Homo sapiens (NCBI)

Features
Gene ID: 23064
  
Biological name :
  
Synonyms : ALS4|AOA2|SCAR1|Sen1|bA479K20.2 / senataxin / SETX
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 201964_at (Human Genome U133 Plus 2.0 Array)   201965_s_at (Human Genome U133 Plus 2.0 Array)   232229_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1034664514
RefSeq - 113722133
RefSeq - 1191017961
RefSeq - 1191017963
RefSeq - 530427120
RefSeq - 530427122
RefSeq - 767956710
RefSeq - 767956712
RefSeq - 767956714
RefSeq - 767956716
RefSeq - 767956718
RefSeq - NC_000009.12
RefSeq - NG_007946.1
RefSeq - NP_001338456.1
RefSeq - NP_001338457.1
RefSeq - NP_055861.3
RefSeq - XP_005272229.1
RefSeq - XP_005272230.1
RefSeq - XP_011516706.1
RefSeq - XP_011516707.1
RefSeq - XP_011516708.1
RefSeq - XP_011516709.1
RefSeq - XP_011516710.1
RefSeq - XP_016869985.1
RefSeq - XM_011518407.1
RefSeq - XM_011518408.3
RefSeq - NM_001351527.1
RefSeq - NM_001351528.1
RefSeq - NM_015046.6
RefSeq - XM_017014496.1
RefSeq - XR_001746251.1
RefSeq - XR_929739.2
RefSeq - XM_005272172.3
RefSeq - XM_005272173.3
RefSeq - XM_011518404.3
RefSeq - XM_011518405.3
RefSeq - XM_011518406.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000107290 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000165 MAPK cascade IDA
 biological_processGO:0006302 double-strand break repair IDA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006353 DNA-templated transcription, termination IMP
 biological_processGO:0006369 termination of RNA polymerase II transcription IEA
 biological_processGO:0006376 mRNA splice site selection IMP
 biological_processGO:0006396 RNA processing TAS
 biological_processGO:0006974 cellular response to DNA damage stimulus IDA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway IDA
 biological_processGO:0010976 positive regulation of neuron projection development IDA
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0033120 positive regulation of RNA splicing IMP
 biological_processGO:0034599 cellular response to oxidative stress IDA
 biological_processGO:0043066 negative regulation of apoptotic process IDA
 biological_processGO:0043491 protein kinase B signaling IDA
 biological_processGO:0044344 cellular response to fibroblast growth factor stimulus IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0060566 positive regulation of DNA-templated transcription, termination IMP
 biological_processGO:0070301 cellular response to hydrogen peroxide IDA
 biological_processGO:0071300 cellular response to retinoic acid IDA
 biological_processGO:2000144 positive regulation of DNA-templated transcription, initiation IMP
 biological_processGO:2000806 positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled IMP
 cellular_componentGO:0000228 nuclear chromosome IDA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0030424 axon IDA
 cellular_componentGO:0030426 growth cone IDA
 cellular_componentGO:0045171 intercellular bridge IDA
 molecular_functionGO:0001147 transcription termination site sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IC
 molecular_functionGO:0003678 DNA helicase activity TAS
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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