27257


Homo sapiens (NCBI)

Features
Gene ID: 27257
  
Biological name :
  
Synonyms : CASM|YJL124C / LSM1 / LSM1 homolog, mRNA degradation associated
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 203534_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 7657313
RefSeq - NC_000008.11
RefSeq - NP_055277.1
RefSeq - NM_014462.2
RefSeq - NR_045492.1
RefSeq - NR_045493.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000175324 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IBA
 biological_processGO:0000375 RNA splicing, via transesterification reactions TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing TAS
 biological_processGO:0016070 RNA metabolic process IBA
 biological_processGO:0019827 stem cell population maintenance IEA
 biological_processGO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay TAS
 biological_processGO:0045665 negative regulation of neuron differentiation IEA
 biological_processGO:0071044 histone mRNA catabolic process IMP
 cellular_componentGO:0000932 P-body IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005845 mRNA cap binding complex IBA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:1990124 messenger ribonucleoprotein complex IEA
 cellular_componentGO:1990726 Lsm1-7-Pat1 complex IBA
 molecular_functionGO:0000339 RNA cap binding IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0036002 pre-mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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