30140


Danio rerio (NCBI)
transcriptionregulationactivitydna-templatedgeneexpressionfactorbindingproteincircadianresponsestimulusdnamesodermdevelopmentrhythmtemperaturelightphotoperiodismprimitivehemopoiesisnuclearchromatinnucleuscomplexcytoplasmrnapolymeraseiisequence-specific

Features
Gene ID: 30140
  
Biological name :
  
Synonyms : clocka / clock circadian regulator a / clock|zCLOCK1|zfCLOCK1
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.16319.1.A1_at (Zebrafish Array)   Dr.8089.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - XP_021324029.1
RefSeq - 688601801
RefSeq - 845631481
RefSeq - NC_007131.7
RefSeq - NP_571032.2
RefSeq - XP_009292908.1
RefSeq - 1207153242
RefSeq - NM_130957.2
RefSeq - XM_021468354.1
RefSeq - XM_009294633.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000011703 to get all the annotations available for this gene.


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcircadian rhythmresponse to abiotic stimulusnitrogen compoundnitrogen compound metabolic processbiosynthetic procbiosynthetic processcellular metabolicellular metabolic processprimary metabolicprimary metabolic processorganic substanceorganic substance metabolic processanatomical structanatomical structure developmentcircadian rhythmcircadian rhythmresponse to abiotresponse to abiotic stimulus
DNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingprotein bindingDNA-binding transcription factor acDNA-binding transcription factor activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingprotein bindingprotein binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007498 mesoderm development IGI
 biological_processGO:0007623 circadian rhythm IMP
 biological_processGO:0009266 response to temperature stimulus IDA
 biological_processGO:0009416 response to light stimulus IGI
 biological_processGO:0009648 photoperiodism IEP
 biological_processGO:0010468 regulation of gene expression IGI
 biological_processGO:0010628 positive regulation of gene expression IGI
 biological_processGO:0032922 circadian regulation of gene expression IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0060215 primitive hemopoiesis IGI
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity NAS
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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