30273


Danio rerio (NCBI)
bindingtranscriptiongastrulationcellmigrationionepithelialmesenchymaltransitionregulationdna-templatedmesodermaldorsalventralpatternformationinvolvednucleusnucleicaciddnadna-bindingfactoractivityzincmetalnf-kappab

Features
Gene ID: 30273
  
Biological name :
  
Synonyms : cb643|sna-1|sna1|snai1|snail1|snail1a|zgc:109820 / snai1a / snail family zinc finger 1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.15.1.S1_a_at (Zebrafish Array)   
  
Cross references: RefSeq - 922959885
RefSeq - 922959964
RefSeq - NC_007122.7
RefSeq - NP_001300628.1
RefSeq - NP_001300629.1
RefSeq - NM_131066.1
RefSeq - NM_001313699.1
RefSeq - NM_001313700.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000056995 to get all the annotations available for this gene.


Gene Ontology (GO)
anatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical structure developmentcellular developmental processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processlocalization of cellmovement of cell or subcellular componentanatomical struanatomical structure developmentcellular develocellular developmental processnitrogen compounitrogen compound metabolic processbiosynthetic prbiosynthetic processcellular metabocellular metabolic processprimary metabolprimary metabolic processorganic substanorganic substance metabolic processlocalization oflocalization of cellmovement of celmovement of cell or subcellular component
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingprotein bindingorganic cyclic compound bindorganic cyclic compound bindingheterocyclic compound bindinheterocyclic compound bindingDNA-binding transcription faDNA-binding transcription factor activityion bindingion bindingprotein bindingprotein binding
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0001837 epithelial to mesenchymal transition IMP
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0007369 gastrulation IDA
 biological_processGO:0008078 mesodermal cell migration IMP
 biological_processGO:0009953 dorsal/ventral pattern formation IMP
 biological_processGO:0042074 cell migration involved in gastrulation IMP
 cellular_componentGO:0005634 nucleus IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051059 NF-kappaB binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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