30482


Danio rerio (NCBI)

Features
Gene ID: 30482
  
Biological name :
  
Synonyms : cb634|fau/gata5|gta5 / gata5 / GATA binding protein 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.8100.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 54306071
RefSeq - NC_007134.7
RefSeq - NP_571310.2
RefSeq - NM_131235.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000017821 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001706 endoderm formation IMP
 biological_processGO:0001889 liver development IMP
 biological_processGO:0003007 heart morphogenesis IMP
 biological_processGO:0003318 cell migration to the midline involved in heart development IMP
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007492 endoderm development IMP
 biological_processGO:0007507 heart development IMP
 biological_processGO:0009887 animal organ morphogenesis IBA
 biological_processGO:0009888 tissue development IBA
 biological_processGO:0030099 myeloid cell differentiation IGI
 biological_processGO:0030878 thyroid gland development IMP
 biological_processGO:0031016 pancreas development IMP
 biological_processGO:0045165 cell fate commitment IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0048468 cell development IBA
 biological_processGO:0048538 thymus development IMP
 biological_processGO:0048565 digestive tract development IBA
 biological_processGO:0048618 post-embryonic foregut morphogenesis IMP
 biological_processGO:0048646 anatomical structure formation involved in morphogenesis IBA
 biological_processGO:0055007 cardiac muscle cell differentiation IMP
 biological_processGO:0060972 left/right pattern formation IMP
 biological_processGO:0060975 cardioblast migration to the midline involved in heart field formation IGI
 biological_processGO:0070121 Kupffer"s vesicle development IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0000990 transcription factor activity, core RNA polymerase binding IDA
 molecular_functionGO:0001076 transcription factor activity, RNA polymerase II transcription factor binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr