30607


Danio rerio (NCBI)

Features
Gene ID: 30607
  
Biological name :
  
Synonyms : NR1A2|TR-beta|TR[b]1|fj24f03|trb|wu:fj24f03 / thrb / thyroid hormone receptor beta
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.8125.1.S1_at (Zebrafish Array)   DrAffx.2.26.A1_at (Zebrafish Array)   DrAffx.2.26.S1_at (Zebrafish Array)   DrAffx.2.26.S1_s_at (Zebrafish Array)   
  
Cross references: RefSeq - 1207139662
RefSeq - 1207139677
RefSeq - 1207139681
RefSeq - 1207139686
RefSeq - 1207139691
RefSeq - 1207139696
RefSeq - 1207139702
RefSeq - 1207139707
RefSeq - 18859511
RefSeq - 528509678
RefSeq - 528509680
RefSeq - 528509686
RefSeq - 688599542
RefSeq - NC_007130.7
RefSeq - NP_571415.1
RefSeq - XP_005159558.1
RefSeq - XP_005159559.1
RefSeq - XP_005159562.1
RefSeq - XP_009292432.1
RefSeq - XP_021323659.1
RefSeq - XP_021323660.1
RefSeq - XP_021323661.1
RefSeq - XP_021323662.1
RefSeq - XP_021323663.1
RefSeq - XP_021323664.1
RefSeq - XP_021323665.1
RefSeq - XP_021323666.1
RefSeq - NM_131340.1
RefSeq - XM_021467991.1
RefSeq - XM_005159501.4
RefSeq - XM_005159502.4
RefSeq - XM_005159505.4
RefSeq - XM_009294157.3
RefSeq - XM_021467984.1
RefSeq - XM_021467985.1
RefSeq - XM_021467986.1
RefSeq - XM_021467987.1
RefSeq - XM_021467988.1
RefSeq - XM_021467989.1
RefSeq - XM_021467990.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000021163 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0002154 thyroid hormone mediated signaling pathway IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0009755 hormone-mediated signaling pathway IBA
 biological_processGO:0009887 animal organ morphogenesis IBA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030878 thyroid gland development IBA
 biological_processGO:0033993 response to lipid IBA
 biological_processGO:0043010 camera-type eye development IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0046549 retinal cone cell development IMP
 biological_processGO:0048839 inner ear development IMP
 biological_processGO:0060509 type I pneumocyte differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001076 transcription factor activity, RNA polymerase II transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IBA
 molecular_functionGO:0004887 thyroid hormone receptor activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070324 thyroid hormone binding ISS
 molecular_functionGO:0098531 transcription factor activity, direct ligand regulated sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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