3066


Homo sapiens (NCBI)

Features
Gene ID: 3066
  
Biological name :
  
Synonyms : HD2|RPD3|YAF1 / HDAC2 / histone deacetylase 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 201833_at (Human Genome U133 Plus 2.0 Array)   242141_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - XP_016866288.1
RefSeq - 293336691
RefSeq - NC_000006.12
RefSeq - NP_001518.3
RefSeq - 1034650041
RefSeq - NR_033441.1
RefSeq - NR_073443.1
RefSeq - NM_001527.3
RefSeq - XM_017010799.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000196591 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0001975 response to amphetamine IEA
 biological_processGO:0003300 cardiac muscle hypertrophy IEA
 biological_processGO:0006338 chromatin remodeling IC
 biological_processGO:0006344 maintenance of chromatin silencing IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0007596 blood coagulation TAS
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0009913 epidermal cell differentiation ISS
 biological_processGO:0010718 positive regulation of epithelial to mesenchymal transition IEA
 biological_processGO:0010870 positive regulation of receptor biosynthetic process IMP
 biological_processGO:0010977 negative regulation of neuron projection development ISS
 biological_processGO:0016358 dendrite development ISS
 biological_processGO:0016575 histone deacetylation IMP
 biological_processGO:0031000 response to caffeine IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0032732 positive regulation of interleukin-1 production IEA
 biological_processGO:0032760 positive regulation of tumor necrosis factor production IEA
 biological_processGO:0032922 circadian regulation of gene expression ISS
 biological_processGO:0032967 positive regulation of collagen biosynthetic process IC
 biological_processGO:0034605 cellular response to heat IEA
 biological_processGO:0035094 response to nicotine IEA
 biological_processGO:0042220 response to cocaine IEA
 biological_processGO:0042475 odontogenesis of dentin-containing tooth ISS
 biological_processGO:0042531 positive regulation of tyrosine phosphorylation of STAT protein IEA
 biological_processGO:0042733 embryonic digit morphogenesis ISS
 biological_processGO:0043044 ATP-dependent chromatin remodeling HDA
 biological_processGO:0043066 negative regulation of apoptotic process ISS
 biological_processGO:0043392 negative regulation of DNA binding IEA
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0045347 negative regulation of MHC class II biosynthetic process IC
 biological_processGO:0045862 positive regulation of proteolysis IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IC
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0048149 behavioral response to ethanol IEA
 biological_processGO:0048714 positive regulation of oligodendrocyte differentiation IEA
 biological_processGO:0055093 response to hyperoxia IEA
 biological_processGO:0060789 hair follicle placode formation ISS
 biological_processGO:0061000 negative regulation of dendritic spine development IEA
 biological_processGO:0061029 eyelid development in camera-type eye ISS
 biological_processGO:0061198 fungiform papilla formation ISS
 biological_processGO:0070301 cellular response to hydrogen peroxide IEA
 biological_processGO:0070932 histone H3 deacetylation ISS
 biological_processGO:0070933 histone H4 deacetylation ISS
 biological_processGO:0071300 cellular response to retinoic acid IEA
 biological_processGO:0071560 cellular response to transforming growth factor beta stimulus IEA
 biological_processGO:1903351 cellular response to dopamine IEA
 biological_processGO:2000757 negative regulation of peptidyl-lysine acetylation IEA
 cellular_componentGO:0000790 nuclear chromatin HDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0016580 Sin3 complex IDA
 cellular_componentGO:0016581 NuRD complex IDA
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0035098 ESC/E(Z) complex IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding HDA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding HDA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IPI
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004407 histone deacetylase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IPI
 molecular_functionGO:0019213 deacetylase activity ISS
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0031072 heat shock protein binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding HDA
 molecular_functionGO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
 molecular_functionGO:0033558 protein deacetylase activity IMP
 molecular_functionGO:0042826 histone deacetylase binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0051059 NF-kappaB binding IPI
 molecular_functionGO:1990841 promoter-specific chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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