30663


Danio rerio (NCBI)

Features
Gene ID: 30663
  
Biological name :
  
Synonyms : rag1 / recombination activating gene 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.5748.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - XP_009296061.1
RefSeq - 528521066
RefSeq - 688616085
RefSeq - NC_007136.7
RefSeq - NP_571464.1
RefSeq - XP_005163033.1
RefSeq - 18859303
RefSeq - NM_131389.1
RefSeq - XM_009297786.3
RefSeq - XM_005162976.4
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000052122 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0010390 histone monoubiquitination ISS
 biological_processGO:0030183 B cell differentiation ISS
 biological_processGO:0033077 T cell differentiation in thymus ISS
 biological_processGO:0033151 V(D)J recombination ISS
 biological_processGO:0065004 protein-DNA complex assembly IPI
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0097519 DNA recombinase complex IPI
 molecular_functionGO:0000287 magnesium ion binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity ISS
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042393 histone binding ISS
 molecular_functionGO:0042803 protein homodimerization activity ISS
 molecular_functionGO:0043565 sequence-specific DNA binding ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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