3159


Homo sapiens (NCBI)

Features
Gene ID: 3159
  
Biological name :
  
Synonyms : high mobility group AT-hook 1 / HMGA1 / HMG-R|HMGA1A|HMGIY
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 206074_s_at (Human Genome U133 Plus 2.0 Array)   210457_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 22208967
RefSeq - 22208971
RefSeq - 22208973
RefSeq - 22208975
RefSeq - 22208979
RefSeq - 4504433
RefSeq - 977380206
RefSeq - 977380208
RefSeq - 977380210
RefSeq - 977380212
RefSeq - 977380214
RefSeq - 977380216
RefSeq - NC_000006.12
RefSeq - NG_029020.1
RefSeq - NP_001306006.1
RefSeq - NP_001306007.1
RefSeq - NP_001306008.1
RefSeq - NP_001306009.1
RefSeq - NP_001306010.1
RefSeq - NP_001306011.1
RefSeq - NP_002122.1
RefSeq - NP_665906.1
RefSeq - NP_665908.1
RefSeq - NP_665909.1
RefSeq - NP_665910.1
RefSeq - NP_665912.1
RefSeq - NM_145905.2
RefSeq - NM_001319077.1
RefSeq - NM_001319078.1
RefSeq - NM_001319079.1
RefSeq - NM_001319080.1
RefSeq - NM_001319081.1
RefSeq - NM_001319082.1
RefSeq - NM_002131.3
RefSeq - NM_145899.2
RefSeq - NM_145901.2
RefSeq - NM_145902.2
RefSeq - NM_145903.2
RefSeq - NM_145904.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000137309 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006268 DNA unwinding involved in DNA replication NAS
 biological_processGO:0006284 base-excision repair IBA
 biological_processGO:0006337 nucleosome disassembly TAS
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0008285 negative regulation of cell proliferation IMP
 biological_processGO:0009615 response to virus IEP
 biological_processGO:0031936 negative regulation of chromatin silencing TAS
 biological_processGO:0035986 senescence-associated heterochromatin focus assembly IDA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0051169 nuclear transport TAS
 biological_processGO:0065003 protein-containing complex assembly TAS
 biological_processGO:0075713 establishment of integrated proviral latency TAS
 biological_processGO:0090402 oncogene-induced cell senescence IDA
 biological_processGO:2000774 positive regulation of cellular senescence IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0035985 senescence-associated heterochromatin focus IDA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex ISS
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0001158 enhancer sequence-specific DNA binding IDA
 molecular_functionGO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding ISS
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003680 AT DNA binding TAS
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IDA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IMP
 molecular_functionGO:0042974 retinoic acid receptor binding IDA
 molecular_functionGO:0042975 peroxisome proliferator activated receptor binding IDA
 molecular_functionGO:0046965 retinoid X receptor binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr