321690


Danio rerio (NCBI)
bindingfactorregulationrnapolymeraseiihistoneactivitydnadna-templateddeacetylationnucleusnucleoplasmtranscriptionalrepressorcomplexcorepromotersequence-specificrepressingcorepressordeacetylase

Features
Gene ID: 321690
  
Biological name :
  
Synonyms : mesoderm induction early response 1a, transcriptional regulator / mier1a / mier1|wu:fb30a02|zgc:56179
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.6498.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 1040691917
RefSeq - 1040691919
RefSeq - 1207177691
RefSeq - 1207177693
RefSeq - 41054659
RefSeq - NC_007117.7
RefSeq - NP_955853.1
RefSeq - XP_017211924.1
RefSeq - XP_017211925.1
RefSeq - XP_021332453.1
RefSeq - XP_021332454.1
RefSeq - NM_199559.1
RefSeq - XM_021476779.1
RefSeq - XM_017356435.2
RefSeq - XM_017356436.2
RefSeq - XM_021476778.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000041072 to get all the annotations available for this gene.


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationnitrogen compound metabnitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic processcellular component orgacellular component organization
transcription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activity, protein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingtranscription coregulator activitytranscription factor activittranscription factor activity, protein bindingorganic cyclic compound bindorganic cyclic compound bindingheterocyclic compound bindinheterocyclic compound bindingprotein bindingprotein bindingtranscription coregulator actranscription coregulator activity
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016575 histone deacetylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0000989 transcription factor activity, transcription factor binding IBA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0042826 histone deacetylase binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr