ENSDARG00000041072


Danio rerio

Features
Gene ID: ENSDARG00000041072
  
Biological name :mier1a
  
Synonyms : mesoderm induction early response 1a, transcriptional regulator / mier1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 34823721
Gene end: 34838413
  
Corresponding Affymetrix probe sets: Dr.6498.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000060168
Ensembl peptide - ENSDARP00000136685
NCBI entrez gene - 321690     See in Manteia.
RefSeq - XM_021476778
RefSeq - XM_021476779
swissprot - F1R6P1
swissprot - A0A0R4IM18
ZFIN ID - ZDB-GENE-030131-409
Ensembl - ENSDARG00000041072
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mier1b / mesoderm induction early response 1b, transcriptional regulator / MIER1* / Q5UAK0* / Q8N108* / MIER1 transcriptional regulator* / Mesoderm induction early response protein 1 *ENSDARG0000000144748
mier3a / mesoderm induction early response 1, family member 3 a / MIER3* / Q7Z3K6* / MIER family member 3*ENSDARG0000000625339
mier3b / mesoderm induction early response 1, family member 3 b / MIER3* / Q3UHF3* / Q7Z3K6* / MIER family member 3* / Mesoderm induction early response protein 3 *ENSDARG0000002128837
mier2 / mesoderm induction early response 1, family member 2 / Q3U3N0* / Q8N344* / MIER family member 2* / Mesoderm induction early response protein 2 *ENSDARG0000007141326


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017884  SANT domain
 IPR031169  Mesoderm induction early response protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr