ENSDARG00000001447


Danio rerio

Features
Gene ID: ENSDARG00000001447
  
Biological name :mier1b
  
Synonyms : mesoderm induction early response 1b, transcriptional regulator / mier1b
  
Possible biological names infered from orthology : Mesoderm induction early response protein 1 / MIER1 / MIER1 transcriptional regulator / Q5UAK0 / Q8N108
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 5811482
Gene end: 5836116
  
Corresponding Affymetrix probe sets: Dr.15854.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122061
NCBI entrez gene - 566167     See in Manteia.
RefSeq - NM_001291343
RefSeq Peptide - NP_001278272
swissprot - E9QHV5
ZFIN ID - ZDB-GENE-070705-170
Ensembl - ENSDARG00000001447
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MIER1ENSGALG00000011118Gallus gallus
 MIER1ENSG00000198160Homo sapiens
 Mier1ENSMUSG00000028522Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mier1a / mesoderm induction early response 1a, transcriptional regulatorENSDARG0000004107245
mier3b / mesoderm induction early response 1, family member 3 b / MIER3* / Q3UHF3* / Q7Z3K6* / MIER family member 3* / Mesoderm induction early response protein 3 *ENSDARG0000002128835
mier3a / mesoderm induction early response 1, family member 3 a / MIER3* / Q7Z3K6* / MIER family member 3*ENSDARG0000000625335
mier2 / mesoderm induction early response 1, family member 2 / Q3U3N0* / Q8N344* / MIER family member 2* / Mesoderm induction early response protein 2 *ENSDARG0000007141327


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR031169  Mesoderm induction early response protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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