3239


Homo sapiens (NCBI)
bindingtranscriptionrnapolymeraseiidnamorphogenesissequence-specificregulationactivitydevelopmentprostateembryonicepithelialinvolvedproximalpromoterfactortranscriptionalactivatorskeletaldna-templatedmulticellularorganismanteriorposteriorpatternspecificationmalegenitalia

Features
Gene ID: 3239
  
Biological name :
  
Synonyms : BDE|BDSD|HOX4I|SPD|SPD1 / homeobox D13 / HOXD13
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 207397_s_at (Human Genome U133 Plus 2.0 Array)   207398_at (Human Genome U133 Plus 2.0 Array)   236681_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 116734702
RefSeq - 767917847
RefSeq - 767917849
RefSeq - NC_000002.12
RefSeq - NG_008137.1
RefSeq - NP_000514.2
RefSeq - XP_011509370.1
RefSeq - XP_011509371.1
RefSeq - NM_000523.3
RefSeq - XM_011511069.2
RefSeq - XM_011511068.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000128714 to get all the annotations available for this gene.


Gene Ontology (GO)
anatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical structure developmentnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to endogenous stimulusresponse to chemicaldevelopmental growthanatomical struanatomical structure developmentnitrogen compounitrogen compound metabolic processbiosynthetic prbiosynthetic processcellular metabocellular metabolic processprimary metabolprimary metabolic processorganic substanorganic substance metabolic processresponse to endresponse to endogenous stimulusresponse to cheresponse to chemicaldevelopmental gdevelopmental growth
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activitychromatin bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor acDNA-binding transcription factor activitychromatin bindingchromatin binding
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0007275 multicellular organism development TAS
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0030539 male genitalia development IEA
 biological_processGO:0033574 response to testosterone IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0048619 embryonic hindgut morphogenesis IEA
 biological_processGO:0060527 prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis IEA
 biological_processGO:0060571 morphogenesis of an epithelial fold IEA
 biological_processGO:0060602 branch elongation of an epithelium IEA
 biological_processGO:0060687 regulation of branching involved in prostate gland morphogenesis IEA
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001158 enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IMP
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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