336266


Danio rerio (NCBI)
activitybindingfibrilorganizationfibronectinregulationextracellularionoxidoreductaseinflammatoryresponsepeptidyl-lysineoxidationspinalcordcollagenlungembryonicviscerocraniummorphogenesisoxidation-reductionprocessroofmouthsomitet-helpercelllineagecommitment

Features
Gene ID: 336266
  
Biological name :
  
Synonyms : fj60c12|im:7157119|loxl3|wu:fj60c12|zgc:162959 / loxl3b / lysyl oxidase-like 3b
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets:
  
Cross references: RefSeq - 1040660723
RefSeq - 1207114155
RefSeq - 224589092
RefSeq - 528497386
RefSeq - 688582103
RefSeq - 688582105
RefSeq - 688582107
RefSeq - NC_007124.7
RefSeq - NP_001139156.1
RefSeq - XP_005156601.1
RefSeq - XP_009305423.1
RefSeq - XP_009305424.1
RefSeq - XP_009305425.1
RefSeq - XP_017214196.1
RefSeq - XP_021336213.1
RefSeq - XM_017358707.2
RefSeq - NM_001089342.1
RefSeq - NM_001145684.2
RefSeq - XM_021480538.1
RefSeq - XM_005156544.4
RefSeq - XM_009307148.3
RefSeq - XM_009307149.3
RefSeq - XM_009307150.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000039563 to get all the annotations available for this gene.


Gene Ontology (GO)
response to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse to stressnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processanatomical structure developmentcellular component organizationimmune responsecellular developmental processcell activationimmune effector processcell adhesioncell communicationcellular response to stimulusresponse response to stressnitrogen nitrogen compound metabolic processcellular cellular metabolic processprimary mprimary metabolic processorganic sorganic substance metabolic processoxidationoxidation-reduction processanatomicaanatomical structure developmentcellular cellular component organizationimmune reimmune responsecellular cellular developmental processcell acticell activationimmune efimmune effector processcell adhecell adhesioncell commcell communicationcellular cellular response to stimulus
protein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingoxidoreductase activitycatalytic activity, acting on a proteinscavenger receptor activityion bindingprotein bindingprotein bindingoxidoreductase activityoxidoreductase activitycatalytic activity, acting ocatalytic activity, acting on a proteinscavenger receptor activityscavenger receptor activityion bindingion binding
extracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regioncellorganellemembraneextracellular regionextracellular regioncellcellorganelleorganellemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response ISS
 biological_processGO:0018057 peptidyl-lysine oxidation ISS
 biological_processGO:0021510 spinal cord development ISS
 biological_processGO:0030199 collagen fibril organization IBA
 biological_processGO:0030324 lung development ISS
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0060021 roof of mouth development ISS
 biological_processGO:0061053 somite development ISS
 biological_processGO:1905590 fibronectin fibril organization ISS
 biological_processGO:2000329 negative regulation of T-helper 17 cell lineage commitment ISS
 biological_processGO:2001046 positive regulation of integrin-mediated signaling pathway ISS
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0001968 fibronectin binding ISS
 molecular_functionGO:0004720 protein-lysine 6-oxidase activity ISS
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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