374148


Gallus gallus (NCBI)

Features
Gene ID: 374148
  
Biological name :
  
Synonyms : SOX9 / SRY (sex determining region Y)-box 9
  
Possible biological names infered from orthology :
  
Species: Gallus gallus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Gga.4543.1.S1_at (Chicken Array)   Gga.5505.1.S1_at (Chicken Array)   Gga.5505.1.S1_a_at (Chicken Array)   Gga.890.1.S1_at (Chicken Array)   
  
Cross references: RefSeq - 45383572
RefSeq - NC_006105.5
RefSeq - NP_989612.1
RefSeq - NM_204281.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSGALG00000004386 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0001502 cartilage condensation IDA
 biological_processGO:0001503 ossification IEA
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IEP
 biological_processGO:0001755 neural crest cell migration IMP
 biological_processGO:0001934 positive regulation of protein phosphorylation IEA
 biological_processGO:0002009 morphogenesis of an epithelium IMP
 biological_processGO:0002053 positive regulation of mesenchymal cell proliferation IEA
 biological_processGO:0002062 chondrocyte differentiation IMP
 biological_processGO:0002683 negative regulation of immune system process IEA
 biological_processGO:0003170 heart valve development IEP
 biological_processGO:0003188 heart valve formation IEA
 biological_processGO:0003203 endocardial cushion morphogenesis IEA
 biological_processGO:0003413 chondrocyte differentiation involved in endochondral bone morphogenesis IEA
 biological_processGO:0003415 chondrocyte hypertrophy IEA
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IDA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007173 epidermal growth factor receptor signaling pathway IEA
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007417 central nervous system development IBA
 biological_processGO:0007507 heart development IBA
 biological_processGO:0008584 male gonad development IEP
 biological_processGO:0010564 regulation of cell cycle process IEA
 biological_processGO:0010634 positive regulation of epithelial cell migration IEA
 biological_processGO:0014036 neural crest cell fate specification IDA
 biological_processGO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling IEA
 biological_processGO:0019100 male germ-line sex determination IEA
 biological_processGO:0019933 cAMP-mediated signaling IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0030502 negative regulation of bone mineralization IEA
 biological_processGO:0030857 negative regulation of epithelial cell differentiation IEA
 biological_processGO:0030858 positive regulation of epithelial cell differentiation IEA
 biological_processGO:0030903 notochord development IEA
 biological_processGO:0030916 otic vesicle formation IEA
 biological_processGO:0031018 endocrine pancreas development IEA
 biological_processGO:0032331 negative regulation of chondrocyte differentiation IEA
 biological_processGO:0032332 positive regulation of chondrocyte differentiation IEA
 biological_processGO:0032808 lacrimal gland development IEA
 biological_processGO:0032967 positive regulation of collagen biosynthetic process IMP
 biological_processGO:0034504 protein localization to nucleus IEA
 biological_processGO:0035019 somatic stem cell population maintenance IEA
 biological_processGO:0035622 intrahepatic bile duct development IEA
 biological_processGO:0036032 neural crest cell delamination IMP
 biological_processGO:0043491 protein kinase B signaling IEA
 biological_processGO:0045662 negative regulation of myoblast differentiation IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0046533 negative regulation of photoreceptor cell differentiation IEA
 biological_processGO:0048566 embryonic digestive tract development IMP
 biological_processGO:0048709 oligodendrocyte differentiation IEA
 biological_processGO:0048873 homeostasis of number of cells within a tissue IMP
 biological_processGO:0050679 positive regulation of epithelial cell proliferation IEA
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IEA
 biological_processGO:0060009 Sertoli cell development IEA
 biological_processGO:0060018 astrocyte fate commitment IEA
 biological_processGO:0060174 limb bud formation IEA
 biological_processGO:0060221 retinal rod cell differentiation IEA
 biological_processGO:0060290 transdifferentiation IMP
 biological_processGO:0060441 epithelial tube branching involved in lung morphogenesis IEA
 biological_processGO:0060487 lung epithelial cell differentiation IEA
 biological_processGO:0060517 epithelial cell proliferation involved in prostatic bud elongation IEA
 biological_processGO:0060532 bronchus cartilage development IEA
 biological_processGO:0060534 trachea cartilage development IEA
 biological_processGO:0060729 intestinal epithelial structure maintenance IEA
 biological_processGO:0060784 regulation of cell proliferation involved in tissue homeostasis IEA
 biological_processGO:0061035 regulation of cartilage development IDA
 biological_processGO:0061046 regulation of branching involved in lung morphogenesis IEA
 biological_processGO:0061145 lung smooth muscle development IEA
 biological_processGO:0070371 ERK1 and ERK2 cascade IEA
 biological_processGO:0070384 Harderian gland development IEA
 biological_processGO:0071260 cellular response to mechanical stimulus IEA
 biological_processGO:0071300 cellular response to retinoic acid IEP
 biological_processGO:0071347 cellular response to interleukin-1 IEA
 biological_processGO:0071364 cellular response to epidermal growth factor stimulus IEA
 biological_processGO:0071504 cellular response to heparin IEA
 biological_processGO:0071560 cellular response to transforming growth factor beta stimulus IEA
 biological_processGO:0071773 cellular response to BMP stimulus IDA
 biological_processGO:0072034 renal vesicle induction IEA
 biological_processGO:0072190 ureter urothelium development IEA
 biological_processGO:0072193 ureter smooth muscle cell differentiation IEA
 biological_processGO:0072197 ureter morphogenesis IEA
 biological_processGO:0072289 metanephric nephron tubule formation IEA
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway IEA
 biological_processGO:0090103 cochlea morphogenesis IEA
 biological_processGO:0090190 positive regulation of branching involved in ureteric bud morphogenesis IEA
 biological_processGO:0090300 positive regulation of neural crest formation IMP
 biological_processGO:0097065 anterior head development IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 biological_processGO:1901203 positive regulation of extracellular matrix assembly IEA
 biological_processGO:1902027 positive regulation of cartilage condensation IMP
 biological_processGO:1902894 negative regulation of pri-miRNA transcription by RNA polymerase II IEA
 biological_processGO:1903011 negative regulation of bone development IMP
 biological_processGO:2000020 positive regulation of male gonad development IEA
 biological_processGO:2000138 positive regulation of cell proliferation involved in heart morphogenesis IEA
 biological_processGO:2000741 positive regulation of mesenchymal stem cell differentiation IEA
 biological_processGO:2000794 regulation of epithelial cell proliferation involved in lung morphogenesis IEA
 biological_processGO:2001054 negative regulation of mesenchymal cell apoptotic process IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0044798 nuclear transcription factor complex IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001158 enhancer sequence-specific DNA binding IDA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008013 beta-catenin binding IEA
 molecular_functionGO:0034236 protein kinase A catalytic subunit binding IEA
 molecular_functionGO:0044390 ubiquitin-like protein conjugating enzyme binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0097157 pre-mRNA intronic binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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