378723


Danio rerio (NCBI)

Features
Gene ID: 378723
  
Biological name :
  
Synonyms : cb236|soxp|wu:fb83g04|wu:fc14d07|zgc:65860|zgc:77389 / sox2 / SRY (sex determining region Y)-box 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.5379.1.A1_at (Zebrafish Array)   DrAffx.2.82.A1_at (Zebrafish Array)   DrAffx.2.82.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 54261783
RefSeq - NC_007133.7
RefSeq - NP_998283.1
RefSeq - NM_213118.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000070913 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007417 central nervous system development IBA
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0021538 epithalamus development IMP
 biological_processGO:0021982 pineal gland development IMP
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030182 neuron differentiation IBA
 biological_processGO:0030900 forebrain development IBA
 biological_processGO:0031099 regeneration IMP
 biological_processGO:0031101 fin regeneration IMP
 biological_processGO:0045165 cell fate commitment IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0048592 eye morphogenesis IMP
 biological_processGO:0048839 inner ear development IBA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IDA
 biological_processGO:0060119 inner ear receptor cell development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IC
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0044798 nuclear transcription factor complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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