393951


Danio rerio (NCBI)

Features
Gene ID: 393951
  
Biological name :
  
Synonyms : id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504 / pre-mRNA processing factor 8 / prpf8
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.25624.3.S1_at (Zebrafish Array)   Dr.5452.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 528501900
RefSeq - XP_005157703.1
RefSeq - NC_007126.7
RefSeq - 169646741
RefSeq - NP_957270.2
RefSeq - NM_200976.2
RefSeq - XM_005157646.4
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000026180 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000244 spliceosomal tri-snRNP complex assembly IMP
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0000386 second spliceosomal transesterification activity IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017070 U6 snRNA binding IEA
 molecular_functionGO:0030619 U1 snRNA binding IBA
 molecular_functionGO:0030620 U2 snRNA binding IBA
 molecular_functionGO:0030623 U5 snRNA binding IEA
 molecular_functionGO:0097157 pre-mRNA intronic binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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