393965


Danio rerio (NCBI)

Features
Gene ID: 393965
  
Biological name :
  
Synonyms : hdac3 / histone deacetylase 3 / zgc:55927
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.9053.1.A1_at (Zebrafish Array)   Dr.9920.2.A1_s_at (Zebrafish Array)   
  
Cross references: RefSeq - 41055869
RefSeq - NC_007125.7
RefSeq - NP_957284.1
RefSeq - NW_018394896.1
RefSeq - NM_200990.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000037514 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISS
 biological_processGO:0001525 angiogenesis IMP
 biological_processGO:0001889 liver development IMP
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IGI
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0048916 posterior lateral line development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0017053 transcriptional repressor complex ISS
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003714 transcription corepressor activity ISS
 molecular_functionGO:0004407 histone deacetylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr