3975


Homo sapiens (NCBI)

Features
Gene ID: 3975
  
Biological name :
  
Synonyms : LHX1 / LIM-1|LIM1 / LIM homeobox 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 206230_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 30410785
RefSeq - NC_000017.11
RefSeq - NP_005559.2
RefSeq - NT_187614.1
RefSeq - NM_005568.4
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000273706 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001655 urogenital system development ISS
 biological_processGO:0001657 ureteric bud development ISS
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IEA
 biological_processGO:0001702 gastrulation with mouth forming second ISS
 biological_processGO:0001705 ectoderm formation ISS
 biological_processGO:0001706 endoderm formation ISS
 biological_processGO:0001822 kidney development ISS
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II ISS
 biological_processGO:0007267 cell-cell signaling ISS
 biological_processGO:0007389 pattern specification process ISS
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0008045 motor neuron axon guidance ISS
 biological_processGO:0009653 anatomical structure morphogenesis ISS
 biological_processGO:0009791 post-embryonic development ISS
 biological_processGO:0009880 embryonic pattern specification ISS
 biological_processGO:0009887 animal organ morphogenesis TAS
 biological_processGO:0009948 anterior/posterior axis specification ISS
 biological_processGO:0009952 anterior/posterior pattern specification ISS
 biological_processGO:0009953 dorsal/ventral pattern formation ISS
 biological_processGO:0010468 regulation of gene expression ISS
 biological_processGO:0010842 retina layer formation ISS
 biological_processGO:0021517 ventral spinal cord development IEA
 biological_processGO:0021527 spinal cord association neuron differentiation ISS
 biological_processGO:0021537 telencephalon development IEA
 biological_processGO:0021549 cerebellum development ISS
 biological_processGO:0021702 cerebellar Purkinje cell differentiation ISS
 biological_processGO:0021871 forebrain regionalization ISS
 biological_processGO:0021937 cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation ISS
 biological_processGO:0032525 somite rostral/caudal axis specification IEA
 biological_processGO:0035502 metanephric part of ureteric bud development IEA
 biological_processGO:0035846 oviduct epithelium development ISS
 biological_processGO:0035847 uterine epithelium development ISS
 biological_processGO:0035849 nephric duct elongation IEA
 biological_processGO:0035852 horizontal cell localization IEA
 biological_processGO:0040019 positive regulation of embryonic development ISS
 biological_processGO:0044344 cellular response to fibroblast growth factor stimulus IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0048646 anatomical structure formation involved in morphogenesis ISS
 biological_processGO:0048703 embryonic viscerocranium morphogenesis ISS
 biological_processGO:0048793 pronephros development IEA
 biological_processGO:0060059 embryonic retina morphogenesis in camera-type eye ISS
 biological_processGO:0060065 uterus development ISS
 biological_processGO:0060066 oviduct development ISS
 biological_processGO:0060067 cervix development ISS
 biological_processGO:0060068 vagina development ISS
 biological_processGO:0060322 head development ISS
 biological_processGO:0060429 epithelium development ISS
 biological_processGO:0061205 paramesonephric duct development ISS
 biological_processGO:0072049 comma-shaped body morphogenesis ISS
 biological_processGO:0072050 S-shaped body morphogenesis ISS
 biological_processGO:0072077 renal vesicle morphogenesis ISS
 biological_processGO:0072177 mesonephric duct development IEA
 biological_processGO:0072178 nephric duct morphogenesis ISS
 biological_processGO:0072224 metanephric glomerulus development IEA
 biological_processGO:0072278 metanephric comma-shaped body morphogenesis IEA
 biological_processGO:0072283 metanephric renal vesicle morphogenesis IEA
 biological_processGO:0072284 metanephric S-shaped body morphogenesis IEA
 biological_processGO:0090009 primitive streak formation ISS
 biological_processGO:0090190 positive regulation of branching involved in ureteric bud morphogenesis ISS
 biological_processGO:0097379 dorsal spinal cord interneuron posterior axon guidance ISS
 biological_processGO:0097477 lateral motor column neuron migration ISS
 biological_processGO:2000543 positive regulation of gastrulation ISS
 biological_processGO:2000744 positive regulation of anterior head development ISS
 biological_processGO:2000768 positive regulation of nephron tubule epithelial cell differentiation ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0032991 protein-containing complex ISS
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0003714 transcription corepressor activity ISS
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr