406637


Danio rerio (NCBI)

Features
Gene ID: 406637
  
Biological name :
  
Synonyms : fc38f05|wu:faa63d12|wu:fc38f05|zgc:64018 / mre11a / MRE11 homolog A, double strand break repair nuclease
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.3160.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 1207117366
RefSeq - 1207117368
RefSeq - 998072079
RefSeq - NC_007126.7
RefSeq - NP_001307188.1
RefSeq - XP_021337049.1
RefSeq - XP_021337050.1
RefSeq - XM_021481374.1
RefSeq - NM_001001407.1
RefSeq - NM_001320259.1
RefSeq - XM_021481375.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000105014 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IBA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006284 base-excision repair IBA
 biological_processGO:0006302 double-strand break repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007062 sister chromatid cohesion IBA
 biological_processGO:0007095 mitotic G2 DNA damage checkpoint IBA
 biological_processGO:0031573 intra-S DNA damage checkpoint IBA
 biological_processGO:0031860 telomeric 3" overhang formation IBA
 biological_processGO:0042138 meiotic DNA double-strand break formation IBA
 biological_processGO:0051321 meiotic cell cycle IEA
 biological_processGO:0097552 mitochondrial double-strand break repair via homologous recombination IBA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IBA
 cellular_componentGO:0000785 chromatin IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0030870 Mre11 complex IEA
 cellular_componentGO:0035861 site of double-strand break IBA
 molecular_functionGO:0000014 single-stranded DNA endodeoxyribonuclease activity IBA
 molecular_functionGO:0003691 double-stranded telomeric DNA binding IBA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0008408 3"-5" exonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030145 manganese ion binding IEA
 molecular_functionGO:0043047 single-stranded telomeric DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr