406730


Danio rerio (NCBI)

Features
Gene ID: 406730
  
Biological name :
  
Synonyms : APEN|apex1a|hm:zehn1532|wu:fc13d11|zap1|zgc:66204 / apex1 / APEX nuclease (multifunctional DNA repair enzyme) 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.20170.2.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 1038986301
RefSeq - 1038986307
RefSeq - 1038986309
RefSeq - 1038986367
RefSeq - 1207171266
RefSeq - NC_007115.7
RefSeq - NP_001315507.1
RefSeq - NP_001315508.1
RefSeq - NP_001315509.1
RefSeq - NP_998586.2
RefSeq - XP_021330658.1
RefSeq - NM_001328578.1
RefSeq - NM_001328579.1
RefSeq - NM_001328580.1
RefSeq - NM_213421.2
RefSeq - XM_021474983.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000045843 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006284 base-excision repair IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0010628 positive regulation of gene expression IMP
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:0060047 heart contraction IMP
 biological_processGO:0080111 DNA demethylation ISS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004528 phosphodiesterase I activity IBA
 molecular_functionGO:0008311 double-stranded DNA 3"-5" exodeoxyribonuclease activity IBA
 molecular_functionGO:0016491 oxidoreductase activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr