406845


Danio rerio (NCBI)

Features
Gene ID: 406845
  
Biological name :
  
Synonyms : msh2 / mutS homolog 2 (E. coli) / wu:fc06b02|wu:fc13e09|zgc:55333
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.2637.1.S1_at (Zebrafish Array)   
  
Cross references: RefSeq - 47087243
RefSeq - NC_007123.7
RefSeq - NP_998689.1
RefSeq - NW_018394844.1
RefSeq - NM_213524.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000018022 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000710 meiotic mismatch repair IBA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006290 pyrimidine dimer repair IBA
 biological_processGO:0006298 mismatch repair ISS
 biological_processGO:0006301 postreplication repair IBA
 biological_processGO:0006302 double-strand break repair IBA
 biological_processGO:0006311 meiotic gene conversion IBA
 biological_processGO:0006312 mitotic recombination IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007050 cell cycle arrest IBA
 biological_processGO:0010165 response to X-ray IBA
 biological_processGO:0010224 response to UV-B IBA
 biological_processGO:0016446 somatic hypermutation of immunoglobulin genes IBA
 biological_processGO:0031573 intra-S DNA damage checkpoint IBA
 biological_processGO:0036297 interstrand cross-link repair IBA
 biological_processGO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IBA
 biological_processGO:0043111 replication fork arrest IBA
 biological_processGO:0043570 maintenance of DNA repeat elements IMP
 biological_processGO:0045128 negative regulation of reciprocal meiotic recombination IBA
 biological_processGO:0045190 isotype switching IBA
 biological_processGO:0051096 positive regulation of helicase activity IBA
 cellular_componentGO:0000228 nuclear chromosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0032300 mismatch repair complex IEA
 cellular_componentGO:0032301 MutSalpha complex IBA
 cellular_componentGO:0032302 MutSbeta complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IBA
 molecular_functionGO:0000400 four-way junction DNA binding IBA
 molecular_functionGO:0000403 Y-form DNA binding IBA
 molecular_functionGO:0000404 heteroduplex DNA loop binding IBA
 molecular_functionGO:0000406 double-strand/single-strand DNA junction binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003684 damaged DNA binding IBA
 molecular_functionGO:0003697 single-stranded DNA binding IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008094 DNA-dependent ATPase activity IBA
 molecular_functionGO:0019901 protein kinase binding IBA
 molecular_functionGO:0030983 mismatched DNA binding IEA
 molecular_functionGO:0032137 guanine/thymine mispair binding IGI
 molecular_functionGO:0032138 single base insertion or deletion binding IBA
 molecular_functionGO:0032142 single guanine insertion binding IBA
 molecular_functionGO:0032143 single thymine insertion binding IBA
 molecular_functionGO:0032181 dinucleotide repeat insertion binding IBA
 molecular_functionGO:0032357 oxidized purine DNA binding IBA
 molecular_functionGO:0032405 MutLalpha complex binding IBA
 molecular_functionGO:0042803 protein homodimerization activity IBA
 molecular_functionGO:0043531 ADP binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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