51542


Homo sapiens (NCBI)
transportgolgiproteintrans-golginetworkbindingvacuolelysosomalretrogradeendosomehomeostasiscellswithintissuemusculoskeletalmovementneurofilamentcytoskeletonorganizationgarpcomplexnucleoplasmapparatuscytosolmembraneperinuclearregioncytoplasmsyntaxin

Features
Gene ID: 51542
  
Biological name :
  
Synonyms : HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L / VPS54 / VPS54, GARP complex subunit
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 218423_x_at (Human Genome U133 Plus 2.0 Array)   222627_at (Human Genome U133 Plus 2.0 Array)   233656_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1034614592
RefSeq - 54234034
RefSeq - 54234040
RefSeq - NC_000002.12
RefSeq - NG_042277.1
RefSeq - NP_001005739.1
RefSeq - NP_057600.2
RefSeq - XP_016859805.1
RefSeq - XR_002959306.1
RefSeq - XM_017004316.1
RefSeq - XR_244939.5
RefSeq - NM_001005739.1
RefSeq - NM_016516.2
RefSeq - XR_001738770.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000143952 to get all the annotations available for this gene.


Gene Ontology (GO)
establishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of localizationcellular localizationmacromolecule localizationregulation of biological qualitymulticellular organismal movementcellular component organizationintermediate filament-based processestablishment of locestablishment of localizationcellular localizatiocellular localizationmacromolecule localimacromolecule localizationregulation of biologregulation of biological qualitymulticellular organimulticellular organismal movementcellular component ocellular component organizationintermediate filamenintermediate filament-based process
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellprotein-containing complexorganellemembrane-enclosed lumenmembranecellcellprotein-containing complexprotein-containing complexorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0006896 Golgi to vacuole transport IBA
 biological_processGO:0007041 lysosomal transport IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IMP
 biological_processGO:0048873 homeostasis of number of cells within a tissue IEA
 biological_processGO:0050881 musculoskeletal movement IEA
 biological_processGO:0060052 neurofilament cytoskeleton organization IEA
 cellular_componentGO:0000938 GARP complex IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005802 trans-Golgi network IMP
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0032588 trans-Golgi network membrane TAS
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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