53615


Homo sapiens (NCBI)

Features
Gene ID: 53615
  
Biological name :
  
Synonyms : MBD3 / methyl-CpG binding domain protein 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 202463_s_at (Human Genome U133 Plus 2.0 Array)   41160_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 527498242
RefSeq - 527498244
RefSeq - NC_000019.10
RefSeq - NG_029897.2
RefSeq - NP_001268382.1
RefSeq - NP_001268383.1
RefSeq - NM_003926.5
RefSeq - NM_001281453.1
RefSeq - NM_001281454.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000071655 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0006346 methylation-dependent chromatin silencing IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0007568 aging IEA
 biological_processGO:0009888 tissue development IEA
 biological_processGO:0016573 histone acetylation IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0031667 response to nutrient levels IEA
 biological_processGO:0032355 response to estradiol IEA
 biological_processGO:0043044 ATP-dependent chromatin remodeling HDA
 biological_processGO:0044030 regulation of DNA methylation IEA
 biological_processGO:0048568 embryonic organ development IEA
 cellular_componentGO:0000790 nuclear chromatin HDA
 cellular_componentGO:0000792 heterochromatin IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016581 NuRD complex NAS
 cellular_componentGO:0032991 protein-containing complex HDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding HDA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding HDA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0004407 histone deacetylase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008327 methyl-CpG binding IDA
 molecular_functionGO:0031492 nucleosomal DNA binding HDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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