54464


Homo sapiens (NCBI)

Features
Gene ID: 54464
  
Biological name :
  
Synonyms : 5 -3 exoribonuclease 1 / SEP1 / XRN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1555785_a_at (Human Genome U133 Plus 2.0 Array)   1570394_at (Human Genome U133 Plus 2.0 Array)   225814_at (Human Genome U133 Plus 2.0 Array)   233632_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1034633959
RefSeq - 1034633962
RefSeq - 1034633966
RefSeq - 110624792
RefSeq - 544583596
RefSeq - 544583598
RefSeq - 578807507
RefSeq - 767926977
RefSeq - 767926979
RefSeq - 767926983
RefSeq - NC_000003.12
RefSeq - NP_001269786.1
RefSeq - NP_001269788.1
RefSeq - NP_061874.3
RefSeq - XP_006713736.1
RefSeq - XP_011511221.1
RefSeq - XP_011511222.1
RefSeq - XP_011511224.1
RefSeq - XP_016862129.1
RefSeq - XP_016862130.1
RefSeq - XP_016862131.1
RefSeq - XM_011512922.2
RefSeq - XM_017006640.1
RefSeq - NM_001042604.1
RefSeq - NM_001282857.1
RefSeq - NM_001282859.1
RefSeq - NM_019001.4
RefSeq - XM_017006641.1
RefSeq - XM_017006642.1
RefSeq - XR_001740178.1
RefSeq - XM_006713673.2
RefSeq - XM_011512919.2
RefSeq - XM_011512920.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000114127 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IMP
 biological_processGO:0016075 rRNA catabolic process IMP
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0032211 negative regulation of telomere maintenance via telomerase IC
 biological_processGO:0033574 response to testosterone IEA
 biological_processGO:0043488 regulation of mRNA stability TAS
 biological_processGO:0071028 nuclear mRNA surveillance IMP
 biological_processGO:0071044 histone mRNA catabolic process IMP
 biological_processGO:0071409 cellular response to cycloheximide IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic ISS
 biological_processGO:1905795 cellular response to puromycin IEA
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0002151 G-quadruplex RNA binding ISS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004534 5"-3" exoribonuclease activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0051880 G-quadruplex DNA binding ISS
 molecular_functionGO:0070034 telomerase RNA binding IC


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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