54840


Homo sapiens (NCBI)

Features
Gene ID: 54840
  
Biological name :
  
Synonyms : AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT / aprataxin / APTX
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 218527_at (Human Genome U133 Plus 2.0 Array)   222658_s_at (Human Genome U133 Plus 2.0 Array)   243132_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 578816548
RefSeq - 1034670424
RefSeq - 1034670427
RefSeq - 1034670435
RefSeq - 1034670440
RefSeq - 1034670443
RefSeq - 1370514640
RefSeq - 1370514642
RefSeq - 1370514645
RefSeq - 1370514648
RefSeq - 1370514655
RefSeq - 1370514658
RefSeq - 1370514661
RefSeq - 1370514663
RefSeq - 28329430
RefSeq - 28329436
RefSeq - 305410829
RefSeq - 305410831
RefSeq - 305410833
RefSeq - 305410835
RefSeq - 305410837
RefSeq - 307746921
RefSeq - 1034670422
RefSeq - 578816550
RefSeq - 767955029
RefSeq - 767955031
RefSeq - NC_000009.12
RefSeq - NG_012821.1
RefSeq - NP_001182177.1
RefSeq - NP_001182178.1
RefSeq - NP_001182179.1
RefSeq - NP_001182180.1
RefSeq - NP_001182181.1
RefSeq - NP_001182183.1
RefSeq - NP_778239.1
RefSeq - NP_778243.1
RefSeq - XP_006716854.1
RefSeq - XP_006716855.1
RefSeq - XP_011516240.1
RefSeq - XP_011516241.1
RefSeq - XP_016870320.1
RefSeq - XP_016870321.1
RefSeq - XP_016870322.1
RefSeq - XP_016870325.1
RefSeq - XP_016870326.1
RefSeq - XP_016870327.1
RefSeq - XP_024303343.1
RefSeq - XP_024303344.1
RefSeq - XP_024303345.1
RefSeq - XP_024303346.1
RefSeq - XP_024303347.1
RefSeq - XP_024303348.1
RefSeq - XP_024303349.1
RefSeq - XP_024303350.1
RefSeq - XM_017014831.1
RefSeq - XM_017014832.1
RefSeq - XM_017014833.2
RefSeq - XM_017014836.2
RefSeq - XM_017014837.2
RefSeq - XM_017014838.1
RefSeq - XM_024447575.1
RefSeq - XM_024447576.1
RefSeq - XM_024447577.1
RefSeq - XM_024447578.1
RefSeq - XM_024447579.1
RefSeq - XM_024447580.1
RefSeq - NM_001195248.1
RefSeq - NM_001195249.1
RefSeq - NM_001195250.1
RefSeq - NM_001195251.1
RefSeq - NM_001195252.1
RefSeq - NM_001195254.1
RefSeq - NM_017692.2
RefSeq - NM_175069.2
RefSeq - NM_175072.1
RefSeq - NM_175073.2
RefSeq - XM_024447581.1
RefSeq - XM_024447582.1
RefSeq - XR_001746325.2
RefSeq - XR_001746326.2
RefSeq - XR_428423.3
RefSeq - XR_929276.3
RefSeq - XR_929277.3
RefSeq - XR_929279.1
RefSeq - NR_036576.1
RefSeq - NR_036577.1
RefSeq - NR_036578.1
RefSeq - NR_036579.1
RefSeq - XM_006716791.4
RefSeq - XM_006716792.3
RefSeq - XM_011517938.2
RefSeq - XM_011517939.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000137074 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000012 single strand break repair IDA
 biological_processGO:0006266 DNA ligation IEA
 biological_processGO:0006302 double-strand break repair IBA
 biological_processGO:0006796 phosphate-containing compound metabolic process IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IMP
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0031647 regulation of protein stability IMP
 biological_processGO:0042542 response to hydrogen peroxide IDA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003684 damaged DNA binding IDA
 molecular_functionGO:0003690 double-stranded DNA binding IDA
 molecular_functionGO:0003697 single-stranded DNA binding IBA
 molecular_functionGO:0003725 double-stranded RNA binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008967 phosphoglycolate phosphatase activity IDA
 molecular_functionGO:0030983 mismatched DNA binding IBA
 molecular_functionGO:0033699 DNA 5"-adenosine monophosphate hydrolase activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IPI
 molecular_functionGO:0051219 phosphoprotein binding IPI
 molecular_functionGO:0070566 adenylyltransferase activity IBA
 molecular_functionGO:0120108 DNA-3"-diphospho-5"-guanosine diphosphatase IEA
 molecular_functionGO:1990165 single-strand break-containing DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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