55054


Homo sapiens (NCBI)

Features
Gene ID: 55054
  
Biological name :
  
Synonyms : APG16L|ATG16A|ATG16L|IBD10|WDR30 / ATG16L1 / autophagy related 16 like 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 220521_s_at (Human Genome U133 Plus 2.0 Array)   232612_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - NP_942593.2
RefSeq - NW_011332690.1
RefSeq - 530371404
RefSeq - 530371408
RefSeq - 578804524
RefSeq - NC_000002.12
RefSeq - XP_005246139.1
RefSeq - XP_005246141.1
RefSeq - XP_005246143.1
RefSeq - XP_006712671.1
RefSeq - NG_023038.1
RefSeq - 124256478
RefSeq - 124256480
RefSeq - 1393169536
RefSeq - 298228964
RefSeq - 298229005
RefSeq - 298229007
RefSeq - 530371400
RefSeq - NP_001177195.1
RefSeq - NP_001177196.1
RefSeq - NP_001350671.1
RefSeq - NP_060444.3
RefSeq - NP_110430.5
RefSeq - XR_241242.3
RefSeq - NM_001190266.1
RefSeq - NM_001190267.1
RefSeq - NM_001363742.1
RefSeq - NM_017974.3
RefSeq - NM_030803.6
RefSeq - NM_198890.2
RefSeq - XM_005246082.3
RefSeq - XM_005246084.2
RefSeq - XM_005246086.2
RefSeq - XM_006712608.3
RefSeq - XR_001738801.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000085978 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly NAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016236 macroautophagy TAS
 biological_processGO:0034497 protein localization to phagophore assembly site IEA
 biological_processGO:0039689 negative stranded viral RNA replication IBA
 biological_processGO:0051260 protein homooligomerization NAS
 biological_processGO:0061739 protein lipidation involved in autophagosome assembly IEA
 biological_processGO:0098792 xenophagy IEA
 cellular_componentGO:0000421 autophagosome membrane IBA
 cellular_componentGO:0005776 autophagosome ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005930 axoneme ISS
 cellular_componentGO:0034045 phagophore assembly site membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019787 ubiquitin-like protein transferase activity TAS
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0051020 GTPase binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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