55269


Homo sapiens (NCBI)

Features
Gene ID: 55269
  
Biological name :
  
Synonyms : paraspeckle component 1 / PSP1 / PSPC1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 218371_s_at (Human Genome U133 Plus 2.0 Array)   222611_s_at (Human Genome U133 Plus 2.0 Array)   222612_at (Human Genome U133 Plus 2.0 Array)   226574_at (Human Genome U133 Plus 2.0 Array)   226724_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1034584629
RefSeq - 109240550
RefSeq - 1237937839
RefSeq - 1237938063
RefSeq - 1393428344
RefSeq - 767977830
RefSeq - 767977832
RefSeq - 767977834
RefSeq - 767977838
RefSeq - 767977840
RefSeq - NC_000013.11
RefSeq - NG_029751.1
RefSeq - NP_001035879.1
RefSeq - NP_001341837.1
RefSeq - NP_001341838.1
RefSeq - NP_001350589.1
RefSeq - XP_011533439.1
RefSeq - XP_011533440.1
RefSeq - XP_011533441.1
RefSeq - XP_011533443.1
RefSeq - XP_011533444.1
RefSeq - XP_016876139.1
RefSeq - NR_149052.1
RefSeq - NR_149053.1
RefSeq - NR_156729.1
RefSeq - XM_011535137.2
RefSeq - XM_011535138.3
RefSeq - XM_011535139.2
RefSeq - XM_011535141.3
RefSeq - NM_001042414.3
RefSeq - NM_001354908.1
RefSeq - NM_001354909.1
RefSeq - NM_001363660.1
RefSeq - XM_011535142.3
RefSeq - XM_017020650.2
RefSeq - XR_002957457.1
RefSeq - XR_941617.2
RefSeq - NR_003272.3
RefSeq - NR_044998.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000121390 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0002218 activation of innate immune response IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0042752 regulation of circadian rhythm ISS
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0048511 rhythmic process IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0042382 paraspeckles IEA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
 molecular_functionGO:0003676 nucleic acid binding IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0070888 E-box binding ISS


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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