555452


Danio rerio (NCBI)

Features
Gene ID: 555452
  
Biological name :
  
Synonyms : taf1 / TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor / wu:fi04f03|wu:fy39f07
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.11396.1.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 113677837
RefSeq - 1207175443
RefSeq - 1207175445
RefSeq - 1207175447
RefSeq - 528479833
RefSeq - NC_007116.7
RefSeq - NP_001038250.1
RefSeq - XP_005165373.1
RefSeq - XP_021331844.1
RefSeq - XP_021331845.1
RefSeq - XP_021331846.1
RefSeq - NM_001044785.1
RefSeq - XM_021476171.1
RefSeq - XM_005165316.4
RefSeq - XM_021476169.1
RefSeq - XM_021476170.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000035330 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030901 midbrain development IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 molecular_functionGO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly IBA
 molecular_functionGO:0001129 RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IBA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0017025 TBP-class protein binding IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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